Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1635 and GFF1636 are separated by 87 nucleotides GFF1636 and GFF1637 are separated by 131 nucleotides GFF1637 and GFF1638 are separated by 6 nucleotides
GFF1635 - hypothetical protein, at 286,454 to 287,416
GFF1635
GFF1636 - Glutathione S-transferase GST-6.0, at 287,504 to 288,163
GFF1636
GFF1637 - hypothetical protein, at 288,295 to 288,762
GFF1637
GFF1638 - hypothetical protein, at 288,769 to 289,272
GFF1638
Position (kb) 287
288
289 Strain fitness (log2 ratio) -2
-1
0
1 at 286.600 kb on + strand, within GFF1635 at 286.601 kb on - strand, within GFF1635 at 286.719 kb on + strand, within GFF1635 at 286.719 kb on + strand, within GFF1635 at 286.720 kb on - strand, within GFF1635 at 286.836 kb on + strand, within GFF1635 at 286.872 kb on + strand, within GFF1635 at 286.873 kb on - strand, within GFF1635 at 287.019 kb on + strand, within GFF1635 at 287.019 kb on + strand, within GFF1635 at 287.019 kb on + strand, within GFF1635 at 287.020 kb on - strand, within GFF1635 at 287.020 kb on - strand, within GFF1635 at 287.020 kb on - strand, within GFF1635 at 287.020 kb on - strand, within GFF1635 at 287.310 kb on + strand, within GFF1635 at 287.311 kb on - strand, within GFF1635 at 287.465 kb on - strand at 287.645 kb on + strand, within GFF1636 at 287.796 kb on - strand, within GFF1636 at 287.813 kb on + strand, within GFF1636 at 287.813 kb on + strand, within GFF1636 at 287.828 kb on + strand, within GFF1636 at 287.829 kb on - strand, within GFF1636 at 287.829 kb on - strand, within GFF1636 at 287.948 kb on + strand, within GFF1636 at 287.948 kb on + strand, within GFF1636 at 287.948 kb on + strand, within GFF1636 at 287.948 kb on + strand, within GFF1636 at 287.948 kb on + strand, within GFF1636 at 287.949 kb on - strand, within GFF1636 at 287.949 kb on - strand, within GFF1636 at 287.949 kb on - strand, within GFF1636 at 288.053 kb on + strand, within GFF1636 at 288.053 kb on + strand, within GFF1636 at 288.053 kb on + strand, within GFF1636 at 288.053 kb on + strand, within GFF1636 at 288.053 kb on + strand, within GFF1636 at 288.110 kb on - strand at 288.110 kb on - strand at 288.110 kb on - strand at 288.110 kb on - strand at 288.275 kb on + strand at 288.293 kb on + strand at 288.448 kb on + strand, within GFF1637 at 288.449 kb on - strand, within GFF1637 at 288.577 kb on + strand, within GFF1637 at 288.577 kb on + strand, within GFF1637 at 288.655 kb on + strand, within GFF1637 at 288.655 kb on + strand, within GFF1637 at 288.655 kb on + strand, within GFF1637 at 288.656 kb on - strand, within GFF1637 at 288.701 kb on - strand, within GFF1637 at 288.736 kb on + strand at 288.788 kb on + strand at 288.788 kb on + strand at 288.788 kb on + strand at 288.789 kb on - strand at 288.920 kb on + strand, within GFF1638 at 288.921 kb on - strand, within GFF1638 at 289.038 kb on - strand, within GFF1638 at 289.098 kb on + strand, within GFF1638 at 289.098 kb on + strand, within GFF1638 at 289.098 kb on + strand, within GFF1638 at 289.099 kb on - strand, within GFF1638
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 286,600 + GFF1635 0.15 +0.3 286,601 - GFF1635 0.15 +0.5 286,719 + GFF1635 0.28 -0.5 286,719 + GFF1635 0.28 +0.6 286,720 - GFF1635 0.28 -0.6 286,836 + GFF1635 0.40 -0.9 286,872 + GFF1635 0.43 +1.3 286,873 - GFF1635 0.44 -2.6 287,019 + GFF1635 0.59 -0.1 287,019 + GFF1635 0.59 -1.3 287,019 + GFF1635 0.59 +0.3 287,020 - GFF1635 0.59 +0.7 287,020 - GFF1635 0.59 +0.7 287,020 - GFF1635 0.59 +0.5 287,020 - GFF1635 0.59 +0.0 287,310 + GFF1635 0.89 +0.2 287,311 - GFF1635 0.89 +0.1 287,465 - +0.4 287,645 + GFF1636 0.21 +0.1 287,796 - GFF1636 0.44 +0.9 287,813 + GFF1636 0.47 +0.2 287,813 + GFF1636 0.47 -0.6 287,828 + GFF1636 0.49 -0.3 287,829 - GFF1636 0.49 -0.8 287,829 - GFF1636 0.49 -1.6 287,948 + GFF1636 0.67 +0.5 287,948 + GFF1636 0.67 -0.7 287,948 + GFF1636 0.67 -0.3 287,948 + GFF1636 0.67 +0.4 287,948 + GFF1636 0.67 +0.9 287,949 - GFF1636 0.67 -1.0 287,949 - GFF1636 0.67 +1.1 287,949 - GFF1636 0.67 -0.5 288,053 + GFF1636 0.83 +0.3 288,053 + GFF1636 0.83 -0.4 288,053 + GFF1636 0.83 -0.2 288,053 + GFF1636 0.83 +0.6 288,053 + GFF1636 0.83 +0.3 288,110 - -0.2 288,110 - +0.5 288,110 - +0.5 288,110 - +0.8 288,275 + +0.7 288,293 + +0.1 288,448 + GFF1637 0.33 +0.4 288,449 - GFF1637 0.33 +0.4 288,577 + GFF1637 0.60 -0.5 288,577 + GFF1637 0.60 -0.9 288,655 + GFF1637 0.77 -0.3 288,655 + GFF1637 0.77 +0.4 288,655 + GFF1637 0.77 -0.7 288,656 - GFF1637 0.77 +0.1 288,701 - GFF1637 0.87 -0.9 288,736 + +0.2 288,788 + +0.7 288,788 + -0.7 288,788 + -0.5 288,789 - -1.1 288,920 + GFF1638 0.30 +0.2 288,921 - GFF1638 0.30 -0.2 289,038 - GFF1638 0.53 -0.3 289,098 + GFF1638 0.65 -0.3 289,098 + GFF1638 0.65 -0.3 289,098 + GFF1638 0.65 +0.5 289,099 - GFF1638 0.65 -0.3
Or see this region's nucleotide sequence