Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1632 and GFF1633 are separated by 57 nucleotides GFF1633 and GFF1634 are separated by 117 nucleotides
GFF1632 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 281,693 to 282,541
GFF1632
GFF1633 - Peptide chain release factor 3, at 282,599 to 284,206
GFF1633
GFF1634 - Esterase EstA, at 284,324 to 286,216
GFF1634
Position (kb) 282
283
284
285 Strain fitness (log2 ratio) -2
-1
0
1 at 281.668 kb on + strand at 281.669 kb on - strand at 282.581 kb on - strand at 283.429 kb on - strand, within GFF1633 at 283.891 kb on - strand, within GFF1633 at 283.891 kb on - strand, within GFF1633 at 284.216 kb on - strand at 284.216 kb on - strand at 284.217 kb on + strand at 284.217 kb on + strand at 284.217 kb on + strand at 284.217 kb on + strand at 284.217 kb on + strand at 284.218 kb on - strand at 284.218 kb on - strand at 284.218 kb on - strand at 284.218 kb on - strand at 284.218 kb on - strand at 284.218 kb on - strand at 284.218 kb on - strand at 284.334 kb on + strand at 284.334 kb on + strand at 284.335 kb on - strand at 284.335 kb on - strand at 284.355 kb on + strand at 284.356 kb on - strand at 284.476 kb on - strand at 284.550 kb on + strand, within GFF1634 at 284.550 kb on + strand, within GFF1634 at 284.550 kb on + strand, within GFF1634 at 284.607 kb on + strand, within GFF1634 at 284.608 kb on - strand, within GFF1634 at 284.608 kb on - strand, within GFF1634 at 284.634 kb on + strand, within GFF1634 at 284.634 kb on + strand, within GFF1634 at 284.634 kb on + strand, within GFF1634 at 284.634 kb on + strand, within GFF1634 at 284.634 kb on + strand, within GFF1634 at 284.634 kb on + strand, within GFF1634 at 284.697 kb on + strand, within GFF1634 at 284.721 kb on + strand, within GFF1634 at 284.721 kb on + strand, within GFF1634 at 284.800 kb on - strand, within GFF1634 at 284.871 kb on + strand, within GFF1634 at 284.872 kb on - strand, within GFF1634 at 284.935 kb on - strand, within GFF1634 at 284.935 kb on - strand, within GFF1634 at 284.964 kb on + strand, within GFF1634 at 284.991 kb on + strand, within GFF1634 at 284.991 kb on + strand, within GFF1634 at 284.992 kb on - strand, within GFF1634 at 285.006 kb on + strand, within GFF1634 at 285.007 kb on - strand, within GFF1634 at 285.063 kb on + strand, within GFF1634 at 285.063 kb on + strand, within GFF1634 at 285.064 kb on - strand, within GFF1634 at 285.120 kb on + strand, within GFF1634 at 285.120 kb on + strand, within GFF1634 at 285.120 kb on + strand, within GFF1634 at 285.120 kb on + strand, within GFF1634 at 285.121 kb on - strand, within GFF1634 at 285.121 kb on - strand, within GFF1634 at 285.121 kb on - strand, within GFF1634 at 285.121 kb on - strand, within GFF1634 at 285.129 kb on + strand, within GFF1634 at 285.129 kb on + strand, within GFF1634 at 285.129 kb on + strand, within GFF1634 at 285.142 kb on + strand, within GFF1634 at 285.142 kb on + strand, within GFF1634 at 285.143 kb on - strand, within GFF1634 at 285.144 kb on + strand, within GFF1634 at 285.160 kb on + strand, within GFF1634 at 285.161 kb on - strand, within GFF1634 at 285.198 kb on + strand, within GFF1634 at 285.198 kb on + strand, within GFF1634 at 285.199 kb on - strand, within GFF1634 at 285.199 kb on - strand, within GFF1634
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 281,668 + +0.6 281,669 - +0.2 282,581 - +1.4 283,429 - GFF1633 0.52 +0.2 283,891 - GFF1633 0.80 +1.0 283,891 - GFF1633 0.80 -0.3 284,216 - -0.9 284,216 - -1.9 284,217 + -1.8 284,217 + +0.1 284,217 + +0.4 284,217 + -1.9 284,217 + -0.1 284,218 - +0.2 284,218 - -0.3 284,218 - +0.4 284,218 - -0.1 284,218 - -0.2 284,218 - +1.0 284,218 - -0.3 284,334 + -0.4 284,334 + +0.2 284,335 - +1.5 284,335 - -1.0 284,355 + +0.4 284,356 - -1.2 284,476 - -0.1 284,550 + GFF1634 0.12 -0.5 284,550 + GFF1634 0.12 +0.5 284,550 + GFF1634 0.12 -0.5 284,607 + GFF1634 0.15 +0.0 284,608 - GFF1634 0.15 +0.8 284,608 - GFF1634 0.15 -0.7 284,634 + GFF1634 0.16 -0.6 284,634 + GFF1634 0.16 -0.5 284,634 + GFF1634 0.16 -0.3 284,634 + GFF1634 0.16 +0.5 284,634 + GFF1634 0.16 +0.9 284,634 + GFF1634 0.16 -1.9 284,697 + GFF1634 0.20 +0.4 284,721 + GFF1634 0.21 -0.5 284,721 + GFF1634 0.21 -0.3 284,800 - GFF1634 0.25 -0.2 284,871 + GFF1634 0.29 +0.4 284,872 - GFF1634 0.29 +0.0 284,935 - GFF1634 0.32 +0.0 284,935 - GFF1634 0.32 -2.0 284,964 + GFF1634 0.34 +0.7 284,991 + GFF1634 0.35 -0.1 284,991 + GFF1634 0.35 -1.0 284,992 - GFF1634 0.35 -0.8 285,006 + GFF1634 0.36 -0.3 285,007 - GFF1634 0.36 -0.4 285,063 + GFF1634 0.39 +0.7 285,063 + GFF1634 0.39 +0.0 285,064 - GFF1634 0.39 -0.5 285,120 + GFF1634 0.42 -0.1 285,120 + GFF1634 0.42 -0.7 285,120 + GFF1634 0.42 +0.8 285,120 + GFF1634 0.42 +1.1 285,121 - GFF1634 0.42 +0.7 285,121 - GFF1634 0.42 -0.1 285,121 - GFF1634 0.42 -0.1 285,121 - GFF1634 0.42 -0.3 285,129 + GFF1634 0.43 +0.0 285,129 + GFF1634 0.43 +0.7 285,129 + GFF1634 0.43 -0.7 285,142 + GFF1634 0.43 +0.1 285,142 + GFF1634 0.43 -1.6 285,143 - GFF1634 0.43 -0.5 285,144 + GFF1634 0.43 +0.4 285,160 + GFF1634 0.44 +0.1 285,161 - GFF1634 0.44 +0.2 285,198 + GFF1634 0.46 -1.8 285,198 + GFF1634 0.46 +0.7 285,199 - GFF1634 0.46 +1.2 285,199 - GFF1634 0.46 +0.6
Or see this region's nucleotide sequence