Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1611 and GFF1612 are separated by 258 nucleotides GFF1612 and GFF1613 are separated by 111 nucleotides GFF1613 and GFF1614 overlap by 4 nucleotides
GFF1611 - hypothetical protein, at 261,972 to 262,796
GFF1611
GFF1612 - hypothetical protein, at 263,055 to 263,720
GFF1612
GFF1613 - hypothetical protein, at 263,832 to 264,047
GFF1613
GFF1614 - hypothetical protein, at 264,044 to 264,283
GFF1614
Position (kb) 263
264 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 262.105 kb on - strand, within GFF1611 at 262.180 kb on + strand, within GFF1611 at 262.213 kb on + strand, within GFF1611 at 262.214 kb on - strand, within GFF1611 at 262.333 kb on + strand, within GFF1611 at 262.334 kb on - strand, within GFF1611 at 262.385 kb on + strand, within GFF1611 at 262.385 kb on + strand, within GFF1611 at 262.385 kb on + strand, within GFF1611 at 262.385 kb on + strand, within GFF1611 at 262.386 kb on - strand, within GFF1611 at 262.386 kb on - strand, within GFF1611 at 262.386 kb on - strand, within GFF1611 at 262.386 kb on - strand, within GFF1611 at 262.486 kb on + strand, within GFF1611 at 262.486 kb on + strand, within GFF1611 at 262.486 kb on + strand, within GFF1611 at 262.486 kb on + strand, within GFF1611 at 262.487 kb on - strand, within GFF1611 at 262.487 kb on - strand, within GFF1611 at 262.487 kb on - strand, within GFF1611 at 262.487 kb on - strand, within GFF1611 at 262.487 kb on - strand, within GFF1611 at 262.511 kb on + strand, within GFF1611 at 262.660 kb on + strand, within GFF1611 at 262.660 kb on + strand, within GFF1611 at 262.661 kb on - strand, within GFF1611 at 262.661 kb on - strand, within GFF1611 at 262.810 kb on + strand at 262.810 kb on + strand at 262.810 kb on + strand at 262.810 kb on + strand at 262.811 kb on - strand at 262.811 kb on - strand at 262.811 kb on - strand at 262.815 kb on - strand at 262.815 kb on - strand at 262.815 kb on - strand at 262.855 kb on + strand at 262.867 kb on - strand at 262.900 kb on - strand at 262.900 kb on - strand at 262.900 kb on - strand at 262.914 kb on - strand at 262.914 kb on - strand at 262.923 kb on + strand at 262.923 kb on + strand at 262.923 kb on + strand at 262.924 kb on - strand at 263.010 kb on + strand at 263.011 kb on - strand at 263.011 kb on - strand at 263.014 kb on + strand at 263.071 kb on + strand at 263.071 kb on + strand at 263.448 kb on + strand, within GFF1612 at 263.449 kb on - strand, within GFF1612 at 263.449 kb on - strand, within GFF1612 at 263.449 kb on - strand, within GFF1612 at 263.527 kb on - strand, within GFF1612 at 263.609 kb on - strand, within GFF1612 at 263.609 kb on - strand, within GFF1612 at 263.609 kb on - strand, within GFF1612 at 263.693 kb on - strand at 263.707 kb on + strand at 263.732 kb on - strand at 263.732 kb on - strand at 263.763 kb on - strand at 263.763 kb on - strand at 263.765 kb on - strand at 263.765 kb on - strand at 263.765 kb on - strand at 263.765 kb on - strand at 263.765 kb on - strand at 263.961 kb on + strand, within GFF1613 at 264.052 kb on + strand at 264.053 kb on - strand at 264.089 kb on + strand, within GFF1614 at 264.089 kb on + strand, within GFF1614 at 264.090 kb on - strand, within GFF1614 at 264.090 kb on - strand, within GFF1614 at 264.130 kb on + strand, within GFF1614 at 264.149 kb on + strand, within GFF1614 at 264.149 kb on + strand, within GFF1614 at 264.149 kb on + strand, within GFF1614 at 264.150 kb on - strand, within GFF1614 at 264.150 kb on - strand, within GFF1614 at 264.150 kb on - strand, within GFF1614 at 264.150 kb on - strand, within GFF1614 at 264.150 kb on - strand, within GFF1614 at 264.291 kb on + strand at 264.292 kb on - strand at 264.297 kb on + strand at 264.298 kb on - strand at 264.298 kb on - strand at 264.591 kb on + strand at 264.592 kb on - strand at 264.646 kb on - strand at 264.646 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 262,105 - GFF1611 0.16 +0.7 262,180 + GFF1611 0.25 -1.3 262,213 + GFF1611 0.29 +0.2 262,214 - GFF1611 0.29 -0.3 262,333 + GFF1611 0.44 -0.6 262,334 - GFF1611 0.44 -0.1 262,385 + GFF1611 0.50 +0.6 262,385 + GFF1611 0.50 +1.0 262,385 + GFF1611 0.50 -0.5 262,385 + GFF1611 0.50 -1.2 262,386 - GFF1611 0.50 +0.7 262,386 - GFF1611 0.50 -1.3 262,386 - GFF1611 0.50 -0.6 262,386 - GFF1611 0.50 -0.5 262,486 + GFF1611 0.62 +1.0 262,486 + GFF1611 0.62 -0.8 262,486 + GFF1611 0.62 -0.5 262,486 + GFF1611 0.62 -0.5 262,487 - GFF1611 0.62 -0.3 262,487 - GFF1611 0.62 -0.0 262,487 - GFF1611 0.62 -0.9 262,487 - GFF1611 0.62 -0.4 262,487 - GFF1611 0.62 +1.3 262,511 + GFF1611 0.65 +0.9 262,660 + GFF1611 0.83 -0.6 262,660 + GFF1611 0.83 -0.7 262,661 - GFF1611 0.84 +0.3 262,661 - GFF1611 0.84 -0.1 262,810 + -1.3 262,810 + -0.9 262,810 + -0.1 262,810 + -0.7 262,811 - -0.4 262,811 - +0.2 262,811 - -0.5 262,815 - +1.4 262,815 - +0.3 262,815 - +1.3 262,855 + -0.5 262,867 - +0.8 262,900 - +1.0 262,900 - +0.6 262,900 - -0.6 262,914 - +1.5 262,914 - -0.8 262,923 + -0.9 262,923 + -1.5 262,923 + -0.7 262,924 - -1.0 263,010 + +0.0 263,011 - -0.7 263,011 - -0.3 263,014 + +0.4 263,071 + -2.9 263,071 + +0.5 263,448 + GFF1612 0.59 -1.1 263,449 - GFF1612 0.59 +0.3 263,449 - GFF1612 0.59 -0.8 263,449 - GFF1612 0.59 +0.9 263,527 - GFF1612 0.71 -1.5 263,609 - GFF1612 0.83 -0.3 263,609 - GFF1612 0.83 -1.1 263,609 - GFF1612 0.83 +0.2 263,693 - +0.4 263,707 + -1.0 263,732 - -0.7 263,732 - +0.5 263,763 - +0.2 263,763 - -1.6 263,765 - -0.2 263,765 - -0.1 263,765 - -0.2 263,765 - -0.6 263,765 - +0.1 263,961 + GFF1613 0.60 +0.9 264,052 + +0.6 264,053 - -0.7 264,089 + GFF1614 0.19 +0.3 264,089 + GFF1614 0.19 -0.2 264,090 - GFF1614 0.19 -0.2 264,090 - GFF1614 0.19 +0.7 264,130 + GFF1614 0.36 +0.7 264,149 + GFF1614 0.44 -0.1 264,149 + GFF1614 0.44 +0.1 264,149 + GFF1614 0.44 -0.5 264,150 - GFF1614 0.44 +0.6 264,150 - GFF1614 0.44 -0.5 264,150 - GFF1614 0.44 -0.4 264,150 - GFF1614 0.44 -0.3 264,150 - GFF1614 0.44 -0.3 264,291 + -1.1 264,292 - -0.1 264,297 + -0.5 264,298 - +0.5 264,298 - +1.1 264,591 + +0.3 264,592 - -0.7 264,646 - -1.1 264,646 - +0.0
Or see this region's nucleotide sequence