Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1595 and GFF1596 are separated by 19 nucleotides GFF1596 and GFF1597 are separated by 776 nucleotides
GFF1595 - hypothetical protein, at 243,531 to 245,336
GFF1595
GFF1596 - hypothetical protein, at 245,356 to 246,486
GFF1596
GFF1597 - Muconate cycloisomerase 1, at 247,263 to 248,414
GFF1597
Position (kb) 245
246
247 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 244.378 kb on - strand, within GFF1595 at 244.707 kb on + strand, within GFF1595 at 244.707 kb on + strand, within GFF1595 at 244.708 kb on - strand, within GFF1595 at 244.708 kb on - strand, within GFF1595 at 244.962 kb on + strand, within GFF1595 at 244.962 kb on + strand, within GFF1595 at 244.962 kb on + strand, within GFF1595 at 244.962 kb on + strand, within GFF1595 at 244.962 kb on + strand, within GFF1595 at 244.962 kb on + strand, within GFF1595 at 244.971 kb on + strand, within GFF1595 at 245.150 kb on + strand, within GFF1595 at 245.151 kb on - strand, within GFF1595 at 245.151 kb on - strand, within GFF1595 at 245.326 kb on - strand at 245.326 kb on - strand at 245.362 kb on - strand at 245.362 kb on - strand at 245.362 kb on - strand at 245.461 kb on + strand at 245.461 kb on + strand at 245.461 kb on + strand at 245.611 kb on + strand, within GFF1596 at 245.611 kb on + strand, within GFF1596 at 245.844 kb on - strand, within GFF1596 at 245.985 kb on + strand, within GFF1596 at 245.986 kb on - strand, within GFF1596 at 245.986 kb on - strand, within GFF1596 at 245.992 kb on - strand, within GFF1596 at 245.992 kb on - strand, within GFF1596 at 246.070 kb on + strand, within GFF1596 at 246.126 kb on + strand, within GFF1596 at 246.166 kb on - strand, within GFF1596 at 246.166 kb on - strand, within GFF1596 at 246.166 kb on - strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.298 kb on + strand, within GFF1596 at 246.299 kb on - strand, within GFF1596 at 246.299 kb on - strand, within GFF1596 at 246.436 kb on + strand at 246.436 kb on + strand at 246.436 kb on + strand at 246.477 kb on + strand at 246.523 kb on + strand at 246.523 kb on + strand at 246.524 kb on - strand at 246.706 kb on + strand at 246.706 kb on + strand at 246.707 kb on - strand at 246.707 kb on - strand at 246.707 kb on - strand at 246.764 kb on + strand at 246.764 kb on + strand at 246.765 kb on - strand at 246.776 kb on - strand at 246.809 kb on + strand at 246.876 kb on + strand at 246.885 kb on - strand at 246.885 kb on - strand at 246.887 kb on - strand at 246.887 kb on - strand at 246.887 kb on - strand at 246.887 kb on - strand at 246.902 kb on + strand at 246.902 kb on + strand at 246.902 kb on + strand at 246.903 kb on - strand at 246.912 kb on + strand at 246.912 kb on + strand at 246.913 kb on - strand at 246.913 kb on - strand at 246.913 kb on - strand at 246.939 kb on + strand at 246.939 kb on + strand at 246.939 kb on + strand at 246.940 kb on - strand at 246.980 kb on - strand at 247.054 kb on + strand at 247.061 kb on - strand at 247.264 kb on + strand at 247.323 kb on + strand at 247.324 kb on - strand at 247.324 kb on - strand at 247.394 kb on + strand, within GFF1597
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 244,378 - GFF1595 0.47 +0.6 244,707 + GFF1595 0.65 -1.0 244,707 + GFF1595 0.65 -0.7 244,708 - GFF1595 0.65 +1.1 244,708 - GFF1595 0.65 -3.1 244,962 + GFF1595 0.79 +0.0 244,962 + GFF1595 0.79 +1.6 244,962 + GFF1595 0.79 -0.2 244,962 + GFF1595 0.79 -0.8 244,962 + GFF1595 0.79 -0.3 244,962 + GFF1595 0.79 +0.6 244,971 + GFF1595 0.80 -0.1 245,150 + GFF1595 0.90 +0.9 245,151 - GFF1595 0.90 -0.6 245,151 - GFF1595 0.90 +0.1 245,326 - -0.5 245,326 - +0.0 245,362 - +0.9 245,362 - +0.4 245,362 - -0.3 245,461 + +1.1 245,461 + -0.4 245,461 + -0.3 245,611 + GFF1596 0.23 -0.5 245,611 + GFF1596 0.23 +0.6 245,844 - GFF1596 0.43 +0.6 245,985 + GFF1596 0.56 -0.1 245,986 - GFF1596 0.56 -0.3 245,986 - GFF1596 0.56 +1.7 245,992 - GFF1596 0.56 +1.6 245,992 - GFF1596 0.56 -0.6 246,070 + GFF1596 0.63 -1.0 246,126 + GFF1596 0.68 +1.3 246,166 - GFF1596 0.72 -0.0 246,166 - GFF1596 0.72 -0.5 246,166 - GFF1596 0.72 -0.0 246,298 + GFF1596 0.83 -0.5 246,298 + GFF1596 0.83 +0.1 246,298 + GFF1596 0.83 +0.1 246,298 + GFF1596 0.83 +1.8 246,298 + GFF1596 0.83 +1.5 246,298 + GFF1596 0.83 +0.4 246,298 + GFF1596 0.83 +1.0 246,299 - GFF1596 0.83 -0.1 246,299 - GFF1596 0.83 -0.3 246,436 + -1.3 246,436 + +0.2 246,436 + +0.7 246,477 + -1.5 246,523 + -0.8 246,523 + -0.7 246,524 - -1.7 246,706 + +0.6 246,706 + -0.0 246,707 - +0.3 246,707 - -0.1 246,707 - -0.7 246,764 + -0.3 246,764 + +0.9 246,765 - -0.8 246,776 - -1.2 246,809 + -1.3 246,876 + +1.0 246,885 - -0.2 246,885 - +0.4 246,887 - +1.0 246,887 - -1.2 246,887 - -0.3 246,887 - +0.4 246,902 + +0.3 246,902 + +0.9 246,902 + +0.7 246,903 - -1.1 246,912 + +0.1 246,912 + -0.5 246,913 - -0.3 246,913 - +0.1 246,913 - +0.5 246,939 + +0.6 246,939 + +0.2 246,939 + +0.0 246,940 - -0.5 246,980 - -0.5 247,054 + -0.2 247,061 - +1.1 247,264 + +1.3 247,323 + -0.2 247,324 - -0.8 247,324 - +0.3 247,394 + GFF1597 0.11 +0.6
Or see this region's nucleotide sequence