Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1494 and GFF1495 are separated by 7 nucleotides GFF1495 and GFF1496 are separated by 161 nucleotides
GFF1494 - N-carbamoyl-L-amino-acid hydrolase, at 132,520 to 133,767
GFF1494
GFF1495 - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxonon atrienedioate hydrolase, at 133,775 to 134,680
GFF1495
GFF1496 - Histidinol-phosphate aminotransferase, at 134,842 to 135,975
GFF1496
Position (kb) 133
134
135 Strain fitness (log2 ratio) -2
-1
0
1
2 at 133.010 kb on + strand, within GFF1494 at 133.203 kb on - strand, within GFF1494 at 133.409 kb on - strand, within GFF1494 at 133.447 kb on + strand, within GFF1494 at 133.490 kb on + strand, within GFF1494 at 133.903 kb on + strand, within GFF1495 at 133.903 kb on + strand, within GFF1495 at 133.959 kb on + strand, within GFF1495 at 133.960 kb on - strand, within GFF1495 at 134.191 kb on - strand, within GFF1495 at 134.262 kb on + strand, within GFF1495 at 134.262 kb on + strand, within GFF1495 at 134.262 kb on + strand, within GFF1495 at 134.451 kb on + strand, within GFF1495 at 134.451 kb on + strand, within GFF1495 at 134.451 kb on + strand, within GFF1495 at 134.502 kb on + strand, within GFF1495 at 134.502 kb on + strand, within GFF1495 at 134.503 kb on - strand, within GFF1495 at 134.650 kb on + strand at 134.673 kb on + strand at 134.673 kb on + strand at 134.673 kb on + strand at 134.674 kb on - strand at 134.674 kb on - strand at 134.674 kb on - strand at 134.981 kb on + strand, within GFF1496 at 134.981 kb on + strand, within GFF1496 at 134.981 kb on + strand, within GFF1496 at 134.981 kb on + strand, within GFF1496 at 134.981 kb on + strand, within GFF1496 at 134.981 kb on + strand, within GFF1496 at 134.981 kb on + strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 134.982 kb on - strand, within GFF1496 at 135.092 kb on + strand, within GFF1496 at 135.092 kb on + strand, within GFF1496 at 135.092 kb on + strand, within GFF1496 at 135.093 kb on - strand, within GFF1496 at 135.411 kb on - strand, within GFF1496 at 135.411 kb on - strand, within GFF1496 at 135.411 kb on - strand, within GFF1496 at 135.521 kb on + strand, within GFF1496 at 135.521 kb on + strand, within GFF1496 at 135.521 kb on + strand, within GFF1496 at 135.522 kb on - strand, within GFF1496 at 135.596 kb on + strand, within GFF1496 at 135.596 kb on + strand, within GFF1496 at 135.596 kb on + strand, within GFF1496 at 135.597 kb on - strand, within GFF1496 at 135.597 kb on - strand, within GFF1496 at 135.597 kb on - strand, within GFF1496 at 135.597 kb on - strand, within GFF1496
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 133,010 + GFF1494 0.39 +0.2 133,203 - GFF1494 0.55 -1.1 133,409 - GFF1494 0.71 -0.9 133,447 + GFF1494 0.74 +0.3 133,490 + GFF1494 0.78 -1.3 133,903 + GFF1495 0.14 -0.5 133,903 + GFF1495 0.14 -0.2 133,959 + GFF1495 0.20 +0.8 133,960 - GFF1495 0.20 +0.6 134,191 - GFF1495 0.46 -0.4 134,262 + GFF1495 0.54 +0.2 134,262 + GFF1495 0.54 -0.4 134,262 + GFF1495 0.54 -0.1 134,451 + GFF1495 0.75 +0.8 134,451 + GFF1495 0.75 -0.0 134,451 + GFF1495 0.75 -1.0 134,502 + GFF1495 0.80 -0.0 134,502 + GFF1495 0.80 -0.8 134,503 - GFF1495 0.80 +2.3 134,650 + +0.6 134,673 + -0.7 134,673 + +0.9 134,673 + -0.8 134,674 - -0.9 134,674 - +0.9 134,674 - +0.7 134,981 + GFF1496 0.12 +0.2 134,981 + GFF1496 0.12 +0.7 134,981 + GFF1496 0.12 -0.7 134,981 + GFF1496 0.12 -2.3 134,981 + GFF1496 0.12 -0.6 134,981 + GFF1496 0.12 -0.5 134,981 + GFF1496 0.12 +0.7 134,982 - GFF1496 0.12 -0.1 134,982 - GFF1496 0.12 +0.5 134,982 - GFF1496 0.12 +1.2 134,982 - GFF1496 0.12 +0.1 134,982 - GFF1496 0.12 -0.0 134,982 - GFF1496 0.12 +0.5 134,982 - GFF1496 0.12 +0.7 135,092 + GFF1496 0.22 -0.5 135,092 + GFF1496 0.22 -0.6 135,092 + GFF1496 0.22 -0.0 135,093 - GFF1496 0.22 +0.2 135,411 - GFF1496 0.50 -1.8 135,411 - GFF1496 0.50 -0.9 135,411 - GFF1496 0.50 -0.4 135,521 + GFF1496 0.60 -0.5 135,521 + GFF1496 0.60 +0.1 135,521 + GFF1496 0.60 -0.1 135,522 - GFF1496 0.60 -0.2 135,596 + GFF1496 0.66 -0.3 135,596 + GFF1496 0.66 +0.7 135,596 + GFF1496 0.66 +1.0 135,597 - GFF1496 0.67 -0.9 135,597 - GFF1496 0.67 -0.4 135,597 - GFF1496 0.67 -1.3 135,597 - GFF1496 0.67 -0.5
Or see this region's nucleotide sequence