Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF142 and GFF143 are separated by 232 nucleotides GFF143 and GFF144 are separated by 96 nucleotides GFF144 and GFF145 are separated by 419 nucleotides
GFF142 - Cytosol aminopeptidase, at 151,731 to 153,227
GFF142
GFF143 - hypothetical protein, at 153,460 to 153,825
GFF143
GFF144 - Signal recognition particle protein, at 153,922 to 155,466
GFF144
GFF145 - Soluble epoxide hydrolase, at 155,886 to 156,779
GFF145
Position (kb) 153
154
155
156 Strain fitness (log2 ratio) -1
0
1 at 153.191 kb on + strand at 153.192 kb on - strand at 153.192 kb on - strand at 153.272 kb on - strand at 153.272 kb on - strand at 153.289 kb on - strand at 153.367 kb on + strand at 153.368 kb on - strand at 153.368 kb on - strand at 153.371 kb on + strand at 153.371 kb on + strand at 153.371 kb on + strand at 153.371 kb on + strand at 153.371 kb on + strand at 153.372 kb on - strand at 153.372 kb on - strand at 155.503 kb on - strand at 155.503 kb on - strand at 155.807 kb on - strand at 156.093 kb on - strand, within GFF145 at 156.093 kb on - strand, within GFF145 at 156.093 kb on - strand, within GFF145 at 156.421 kb on - strand, within GFF145 at 156.421 kb on - strand, within GFF145 at 156.421 kb on - strand, within GFF145
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 153,191 + -0.4 153,192 - -1.5 153,192 - -0.8 153,272 - -0.1 153,272 - -0.3 153,289 - -0.5 153,367 + -0.9 153,368 - -1.2 153,368 - -1.5 153,371 + +0.4 153,371 + +0.4 153,371 + +0.3 153,371 + +0.4 153,371 + -0.3 153,372 - -0.5 153,372 - +0.0 155,503 - +0.4 155,503 - -0.1 155,807 - +1.2 156,093 - GFF145 0.23 +0.4 156,093 - GFF145 0.23 +0.6 156,093 - GFF145 0.23 -0.3 156,421 - GFF145 0.60 -1.6 156,421 - GFF145 0.60 +0.9 156,421 - GFF145 0.60 +0.5
Or see this region's nucleotide sequence