Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS41925 and QEN71_RS41930 are separated by 361 nucleotides
QEN71_RS41925: QEN71_RS41925 - 7-carboxy-7-deazaguanine synthase QueE, at 469,461 to 470,168
_RS41925
QEN71_RS41930: QEN71_RS41930 - cytolethal distending toxin subunit B family protein, at 470,530 to 471,405
_RS41930
Position (kb) 469
470
471 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 468.461 kb on - strand at 468.507 kb on - strand at 468.515 kb on - strand at 468.515 kb on - strand at 468.560 kb on + strand at 468.572 kb on + strand at 468.581 kb on + strand at 468.640 kb on - strand at 468.651 kb on + strand at 468.663 kb on + strand at 468.664 kb on - strand at 468.668 kb on + strand at 468.669 kb on - strand at 468.669 kb on - strand at 468.722 kb on + strand at 468.722 kb on + strand at 468.723 kb on - strand at 468.723 kb on - strand at 468.752 kb on - strand at 468.752 kb on - strand at 468.752 kb on - strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.852 kb on + strand at 468.852 kb on + strand at 468.853 kb on - strand at 468.962 kb on + strand at 468.985 kb on + strand at 468.985 kb on + strand at 468.989 kb on - strand at 469.122 kb on + strand at 469.122 kb on + strand at 469.122 kb on + strand at 469.122 kb on + strand at 469.123 kb on - strand at 469.123 kb on - strand at 469.131 kb on + strand at 469.131 kb on + strand at 469.178 kb on + strand at 469.178 kb on + strand at 469.179 kb on - strand at 469.179 kb on - strand at 469.231 kb on + strand at 469.248 kb on + strand at 469.261 kb on - strand at 469.263 kb on + strand at 469.263 kb on + strand at 469.264 kb on - strand at 469.264 kb on - strand at 469.264 kb on - strand at 469.302 kb on + strand at 469.303 kb on - strand at 469.306 kb on + strand at 469.306 kb on + strand at 469.306 kb on + strand at 469.307 kb on - strand at 469.323 kb on + strand at 469.323 kb on + strand at 469.324 kb on - strand at 469.447 kb on + strand at 469.447 kb on + strand at 469.447 kb on + strand at 469.447 kb on + strand at 469.448 kb on - strand at 469.475 kb on - strand at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.701 kb on + strand, within QEN71_RS41925 at 469.702 kb on - strand, within QEN71_RS41925 at 469.702 kb on - strand, within QEN71_RS41925 at 469.762 kb on + strand, within QEN71_RS41925 at 469.762 kb on + strand, within QEN71_RS41925 at 469.762 kb on + strand, within QEN71_RS41925 at 469.762 kb on + strand, within QEN71_RS41925 at 469.762 kb on + strand, within QEN71_RS41925 at 469.763 kb on - strand, within QEN71_RS41925 at 469.791 kb on + strand, within QEN71_RS41925 at 469.791 kb on + strand, within QEN71_RS41925 at 469.791 kb on + strand, within QEN71_RS41925 at 469.791 kb on + strand, within QEN71_RS41925 at 469.792 kb on - strand, within QEN71_RS41925 at 469.792 kb on - strand, within QEN71_RS41925 at 469.792 kb on - strand, within QEN71_RS41925 at 469.792 kb on - strand, within QEN71_RS41925 at 469.863 kb on + strand, within QEN71_RS41925 at 469.863 kb on + strand, within QEN71_RS41925 at 469.863 kb on + strand, within QEN71_RS41925 at 469.864 kb on - strand, within QEN71_RS41925 at 469.864 kb on - strand, within QEN71_RS41925 at 469.864 kb on - strand, within QEN71_RS41925 at 469.864 kb on - strand, within QEN71_RS41925 at 469.911 kb on + strand, within QEN71_RS41925 at 469.912 kb on - strand, within QEN71_RS41925 at 469.975 kb on - strand, within QEN71_RS41925 at 470.003 kb on + strand, within QEN71_RS41925 at 470.004 kb on - strand, within QEN71_RS41925 at 470.004 kb on - strand, within QEN71_RS41925 at 470.004 kb on - strand, within QEN71_RS41925 at 470.147 kb on + strand at 470.147 kb on + strand at 470.148 kb on - strand at 470.148 kb on - strand at 470.148 kb on - strand at 470.148 kb on - strand at 470.166 kb on + strand at 470.166 kb on + strand at 470.167 kb on - strand at 470.383 kb on + strand at 470.390 kb on + strand at 470.420 kb on + strand at 470.420 kb on + strand at 470.420 kb on + strand at 470.420 kb on + strand at 470.421 kb on - strand at 470.488 kb on - strand at 470.503 kb on + strand at 470.503 kb on + strand at 470.566 kb on + strand at 470.567 kb on - strand at 470.667 kb on + strand, within QEN71_RS41930 at 470.673 kb on + strand, within QEN71_RS41930 at 470.682 kb on - strand, within QEN71_RS41930 at 470.733 kb on + strand, within QEN71_RS41930 at 470.733 kb on + strand, within QEN71_RS41930 at 470.734 kb on - strand, within QEN71_RS41930 at 470.734 kb on - strand, within QEN71_RS41930 at 470.837 kb on + strand, within QEN71_RS41930 at 470.845 kb on + strand, within QEN71_RS41930 at 470.845 kb on + strand, within QEN71_RS41930 at 470.845 kb on + strand, within QEN71_RS41930 at 470.884 kb on + strand, within QEN71_RS41930 at 470.884 kb on + strand, within QEN71_RS41930 at 470.887 kb on + strand, within QEN71_RS41930 at 470.888 kb on - strand, within QEN71_RS41930 at 470.888 kb on - strand, within QEN71_RS41930 at 470.888 kb on - strand, within QEN71_RS41930 at 470.888 kb on - strand, within QEN71_RS41930 at 470.966 kb on + strand, within QEN71_RS41930 at 471.008 kb on + strand, within QEN71_RS41930 at 471.035 kb on - strand, within QEN71_RS41930 at 471.037 kb on + strand, within QEN71_RS41930 at 471.106 kb on + strand, within QEN71_RS41930
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 468,461 - +0.6 468,507 - +0.6 468,515 - -0.3 468,515 - -0.1 468,560 + -0.3 468,572 + +0.5 468,581 + -0.8 468,640 - -1.5 468,651 + +0.1 468,663 + -0.6 468,664 - +0.2 468,668 + +0.2 468,669 - -0.3 468,669 - -0.2 468,722 + -0.0 468,722 + -0.6 468,723 - -1.6 468,723 - -2.5 468,752 - +1.0 468,752 - +0.3 468,752 - -0.6 468,759 + +0.8 468,759 + -0.2 468,852 + +0.1 468,852 + -1.5 468,853 - -0.8 468,962 + -0.9 468,985 + -1.2 468,985 + -0.4 468,989 - +0.3 469,122 + +1.2 469,122 + -0.6 469,122 + +0.3 469,122 + +0.0 469,123 - -2.3 469,123 - -1.1 469,131 + +2.0 469,131 + -1.3 469,178 + -1.3 469,178 + -0.9 469,179 - +1.2 469,179 - -1.8 469,231 + -1.7 469,248 + -1.2 469,261 - -0.4 469,263 + -1.9 469,263 + -0.5 469,264 - +0.5 469,264 - +0.9 469,264 - -0.9 469,302 + -0.0 469,303 - +0.4 469,306 + -0.8 469,306 + +1.3 469,306 + -0.0 469,307 - -0.4 469,323 + +0.5 469,323 + -0.4 469,324 - -0.2 469,447 + -0.1 469,447 + +0.3 469,447 + -0.2 469,447 + +0.1 469,448 - -0.6 469,475 - -0.4 469,701 + QEN71_RS41925 0.34 -0.3 469,701 + QEN71_RS41925 0.34 -2.9 469,701 + QEN71_RS41925 0.34 +0.1 469,701 + QEN71_RS41925 0.34 -0.5 469,701 + QEN71_RS41925 0.34 -1.7 469,701 + QEN71_RS41925 0.34 -0.6 469,701 + QEN71_RS41925 0.34 +0.2 469,701 + QEN71_RS41925 0.34 +0.3 469,702 - QEN71_RS41925 0.34 +1.4 469,702 - QEN71_RS41925 0.34 -0.5 469,762 + QEN71_RS41925 0.43 -0.1 469,762 + QEN71_RS41925 0.43 +1.0 469,762 + QEN71_RS41925 0.43 -1.1 469,762 + QEN71_RS41925 0.43 -0.1 469,762 + QEN71_RS41925 0.43 -0.1 469,763 - QEN71_RS41925 0.43 -1.1 469,791 + QEN71_RS41925 0.47 -0.8 469,791 + QEN71_RS41925 0.47 -0.8 469,791 + QEN71_RS41925 0.47 -0.0 469,791 + QEN71_RS41925 0.47 -0.2 469,792 - QEN71_RS41925 0.47 +0.2 469,792 - QEN71_RS41925 0.47 -0.4 469,792 - QEN71_RS41925 0.47 -0.2 469,792 - QEN71_RS41925 0.47 -1.1 469,863 + QEN71_RS41925 0.57 +0.7 469,863 + QEN71_RS41925 0.57 -0.5 469,863 + QEN71_RS41925 0.57 +0.2 469,864 - QEN71_RS41925 0.57 +0.2 469,864 - QEN71_RS41925 0.57 -0.0 469,864 - QEN71_RS41925 0.57 +1.1 469,864 - QEN71_RS41925 0.57 -0.5 469,911 + QEN71_RS41925 0.64 +0.4 469,912 - QEN71_RS41925 0.64 -0.8 469,975 - QEN71_RS41925 0.73 -0.5 470,003 + QEN71_RS41925 0.77 -0.6 470,004 - QEN71_RS41925 0.77 -0.0 470,004 - QEN71_RS41925 0.77 -0.1 470,004 - QEN71_RS41925 0.77 -1.7 470,147 + -1.0 470,147 + -0.9 470,148 - -0.8 470,148 - -0.8 470,148 - -0.0 470,148 - -1.2 470,166 + -0.6 470,166 + -0.0 470,167 - +1.0 470,383 + +0.8 470,390 + -0.1 470,420 + +0.2 470,420 + -1.6 470,420 + -1.1 470,420 + -0.0 470,421 - -1.5 470,488 - +0.7 470,503 + -1.2 470,503 + -0.7 470,566 + +0.2 470,567 - +0.1 470,667 + QEN71_RS41930 0.16 -0.3 470,673 + QEN71_RS41930 0.16 -0.6 470,682 - QEN71_RS41930 0.17 -0.4 470,733 + QEN71_RS41930 0.23 -0.3 470,733 + QEN71_RS41930 0.23 -0.0 470,734 - QEN71_RS41930 0.23 -0.4 470,734 - QEN71_RS41930 0.23 +0.3 470,837 + QEN71_RS41930 0.35 +1.0 470,845 + QEN71_RS41930 0.36 -1.7 470,845 + QEN71_RS41930 0.36 -0.2 470,845 + QEN71_RS41930 0.36 -0.8 470,884 + QEN71_RS41930 0.40 +0.3 470,884 + QEN71_RS41930 0.40 +0.4 470,887 + QEN71_RS41930 0.41 +1.5 470,888 - QEN71_RS41930 0.41 -2.0 470,888 - QEN71_RS41930 0.41 -0.1 470,888 - QEN71_RS41930 0.41 +1.7 470,888 - QEN71_RS41930 0.41 +0.4 470,966 + QEN71_RS41930 0.50 -0.7 471,008 + QEN71_RS41930 0.55 +0.7 471,035 - QEN71_RS41930 0.58 -0.6 471,037 + QEN71_RS41930 0.58 -2.3 471,106 + QEN71_RS41930 0.66 +1.8
Or see this region's nucleotide sequence