Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS41560 and QEN71_RS41565 overlap by 1 nucleotides QEN71_RS41565 and QEN71_RS41570 overlap by 1 nucleotides QEN71_RS41570 and QEN71_RS41575 are separated by 660 nucleotides
QEN71_RS41560: QEN71_RS41560 - hypothetical protein, at 399,275 to 399,583
_RS41560
QEN71_RS41565: QEN71_RS41565 - hypothetical protein, at 399,583 to 399,945
_RS41565
QEN71_RS41570: QEN71_RS41570 - divalent metal cation transporter, at 399,945 to 401,158
_RS41570
QEN71_RS41575: QEN71_RS41575 - alpha/beta fold hydrolase, at 401,819 to 402,739
_RS41575
Position (kb) 399
400
401
402 Strain fitness (log2 ratio) -2
-1
0
1
2 at 398.982 kb on + strand at 398.983 kb on - strand at 398.999 kb on - strand at 399.004 kb on - strand at 399.040 kb on + strand at 399.041 kb on - strand at 399.181 kb on + strand at 399.410 kb on + strand, within QEN71_RS41560 at 399.419 kb on + strand, within QEN71_RS41560 at 399.420 kb on - strand, within QEN71_RS41560 at 399.420 kb on - strand, within QEN71_RS41560 at 399.524 kb on + strand, within QEN71_RS41560 at 399.568 kb on + strand at 399.651 kb on + strand, within QEN71_RS41565 at 399.785 kb on + strand, within QEN71_RS41565 at 399.946 kb on + strand at 399.946 kb on + strand at 399.947 kb on - strand at 399.947 kb on - strand at 400.060 kb on + strand at 400.060 kb on + strand at 400.137 kb on + strand, within QEN71_RS41570 at 400.138 kb on - strand, within QEN71_RS41570 at 400.138 kb on - strand, within QEN71_RS41570 at 400.204 kb on + strand, within QEN71_RS41570 at 400.204 kb on + strand, within QEN71_RS41570 at 400.204 kb on + strand, within QEN71_RS41570 at 400.282 kb on + strand, within QEN71_RS41570 at 400.282 kb on + strand, within QEN71_RS41570 at 400.283 kb on - strand, within QEN71_RS41570 at 400.283 kb on - strand, within QEN71_RS41570 at 400.350 kb on + strand, within QEN71_RS41570 at 400.351 kb on - strand, within QEN71_RS41570 at 400.351 kb on - strand, within QEN71_RS41570 at 400.402 kb on + strand, within QEN71_RS41570 at 400.402 kb on + strand, within QEN71_RS41570 at 400.402 kb on + strand, within QEN71_RS41570 at 400.402 kb on + strand, within QEN71_RS41570 at 400.402 kb on + strand, within QEN71_RS41570 at 400.402 kb on + strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.403 kb on - strand, within QEN71_RS41570 at 400.490 kb on + strand, within QEN71_RS41570 at 400.525 kb on + strand, within QEN71_RS41570 at 400.525 kb on + strand, within QEN71_RS41570 at 400.564 kb on + strand, within QEN71_RS41570 at 400.564 kb on + strand, within QEN71_RS41570 at 400.565 kb on - strand, within QEN71_RS41570 at 400.565 kb on - strand, within QEN71_RS41570 at 400.617 kb on + strand, within QEN71_RS41570 at 400.633 kb on + strand, within QEN71_RS41570 at 400.775 kb on + strand, within QEN71_RS41570 at 400.775 kb on + strand, within QEN71_RS41570 at 400.776 kb on - strand, within QEN71_RS41570 at 400.776 kb on - strand, within QEN71_RS41570 at 400.905 kb on - strand, within QEN71_RS41570 at 401.018 kb on + strand, within QEN71_RS41570 at 401.018 kb on + strand, within QEN71_RS41570 at 401.019 kb on - strand, within QEN71_RS41570 at 401.019 kb on - strand, within QEN71_RS41570 at 401.019 kb on - strand, within QEN71_RS41570 at 401.272 kb on + strand at 401.273 kb on - strand at 401.279 kb on + strand at 401.406 kb on + strand at 401.407 kb on - strand at 401.407 kb on - strand at 401.577 kb on - strand at 401.617 kb on - strand at 401.637 kb on + strand at 401.637 kb on + strand at 401.637 kb on + strand at 401.638 kb on - strand at 401.638 kb on - strand at 401.677 kb on + strand at 401.677 kb on + strand at 401.764 kb on - strand at 401.957 kb on + strand, within QEN71_RS41575 at 401.957 kb on + strand, within QEN71_RS41575 at 401.957 kb on + strand, within QEN71_RS41575 at 401.957 kb on + strand, within QEN71_RS41575 at 401.957 kb on + strand, within QEN71_RS41575 at 401.958 kb on - strand, within QEN71_RS41575 at 401.958 kb on - strand, within QEN71_RS41575 at 401.958 kb on - strand, within QEN71_RS41575 at 401.958 kb on - strand, within QEN71_RS41575 at 401.958 kb on - strand, within QEN71_RS41575 at 401.960 kb on - strand, within QEN71_RS41575 at 402.028 kb on - strand, within QEN71_RS41575 at 402.069 kb on - strand, within QEN71_RS41575 at 402.069 kb on - strand, within QEN71_RS41575
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 398,982 + -0.2 398,983 - -0.3 398,999 - -1.1 399,004 - +0.1 399,040 + -2.0 399,041 - -1.0 399,181 + -0.7 399,410 + QEN71_RS41560 0.44 -1.1 399,419 + QEN71_RS41560 0.47 -0.2 399,420 - QEN71_RS41560 0.47 -1.6 399,420 - QEN71_RS41560 0.47 +1.0 399,524 + QEN71_RS41560 0.81 -0.8 399,568 + -0.3 399,651 + QEN71_RS41565 0.19 -1.9 399,785 + QEN71_RS41565 0.56 +0.0 399,946 + -0.2 399,946 + +0.1 399,947 - -0.0 399,947 - -0.7 400,060 + +0.4 400,060 + -0.3 400,137 + QEN71_RS41570 0.16 -0.6 400,138 - QEN71_RS41570 0.16 -0.5 400,138 - QEN71_RS41570 0.16 -0.9 400,204 + QEN71_RS41570 0.21 +0.3 400,204 + QEN71_RS41570 0.21 -0.5 400,204 + QEN71_RS41570 0.21 +1.7 400,282 + QEN71_RS41570 0.28 -0.9 400,282 + QEN71_RS41570 0.28 +0.9 400,283 - QEN71_RS41570 0.28 +0.0 400,283 - QEN71_RS41570 0.28 -0.0 400,350 + QEN71_RS41570 0.33 -0.7 400,351 - QEN71_RS41570 0.33 -0.3 400,351 - QEN71_RS41570 0.33 -0.6 400,402 + QEN71_RS41570 0.38 +2.4 400,402 + QEN71_RS41570 0.38 -0.0 400,402 + QEN71_RS41570 0.38 -0.1 400,402 + QEN71_RS41570 0.38 -0.4 400,402 + QEN71_RS41570 0.38 -1.0 400,402 + QEN71_RS41570 0.38 -1.6 400,403 - QEN71_RS41570 0.38 +1.1 400,403 - QEN71_RS41570 0.38 -1.3 400,403 - QEN71_RS41570 0.38 +1.0 400,403 - QEN71_RS41570 0.38 -0.5 400,403 - QEN71_RS41570 0.38 -0.6 400,403 - QEN71_RS41570 0.38 -0.6 400,403 - QEN71_RS41570 0.38 -0.7 400,403 - QEN71_RS41570 0.38 +0.3 400,490 + QEN71_RS41570 0.45 -1.1 400,525 + QEN71_RS41570 0.48 -0.0 400,525 + QEN71_RS41570 0.48 -0.0 400,564 + QEN71_RS41570 0.51 -0.4 400,564 + QEN71_RS41570 0.51 -0.7 400,565 - QEN71_RS41570 0.51 -0.2 400,565 - QEN71_RS41570 0.51 -0.3 400,617 + QEN71_RS41570 0.55 -1.7 400,633 + QEN71_RS41570 0.57 -0.9 400,775 + QEN71_RS41570 0.68 -0.9 400,775 + QEN71_RS41570 0.68 -2.0 400,776 - QEN71_RS41570 0.68 -0.0 400,776 - QEN71_RS41570 0.68 -0.9 400,905 - QEN71_RS41570 0.79 +0.4 401,018 + QEN71_RS41570 0.88 -0.2 401,018 + QEN71_RS41570 0.88 +1.6 401,019 - QEN71_RS41570 0.88 -0.0 401,019 - QEN71_RS41570 0.88 -0.0 401,019 - QEN71_RS41570 0.88 -1.0 401,272 + -0.4 401,273 - -0.2 401,279 + -1.4 401,406 + +0.7 401,407 - -0.2 401,407 - +0.4 401,577 - -0.3 401,617 - -0.5 401,637 + -0.2 401,637 + -0.0 401,637 + +0.0 401,638 - -0.5 401,638 - +1.0 401,677 + +0.7 401,677 + +1.4 401,764 - -0.7 401,957 + QEN71_RS41575 0.15 -0.2 401,957 + QEN71_RS41575 0.15 -0.3 401,957 + QEN71_RS41575 0.15 +0.2 401,957 + QEN71_RS41575 0.15 +0.6 401,957 + QEN71_RS41575 0.15 +1.2 401,958 - QEN71_RS41575 0.15 +0.7 401,958 - QEN71_RS41575 0.15 -2.2 401,958 - QEN71_RS41575 0.15 -0.7 401,958 - QEN71_RS41575 0.15 -0.1 401,958 - QEN71_RS41575 0.15 -0.2 401,960 - QEN71_RS41575 0.15 +1.4 402,028 - QEN71_RS41575 0.23 -0.5 402,069 - QEN71_RS41575 0.27 +1.0 402,069 - QEN71_RS41575 0.27 -0.6
Or see this region's nucleotide sequence