Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS40730 and QEN71_RS40735 are separated by 46 nucleotides QEN71_RS40735 and QEN71_RS40740 are separated by 30 nucleotides
QEN71_RS40730: QEN71_RS40730 - lipopolysaccharide biosynthesis protein, at 205,792 to 207,117
_RS40730
QEN71_RS40735: QEN71_RS40735 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 207,164 to 208,411
_RS40735
QEN71_RS40740: QEN71_RS40740 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 208,442 to 209,602
_RS40740
Position (kb) 207
208
209 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 206.247 kb on + strand, within QEN71_RS40730 at 206.310 kb on - strand, within QEN71_RS40730 at 206.419 kb on + strand, within QEN71_RS40730 at 206.442 kb on + strand, within QEN71_RS40730 at 206.444 kb on + strand, within QEN71_RS40730 at 206.463 kb on + strand, within QEN71_RS40730 at 206.463 kb on + strand, within QEN71_RS40730 at 206.464 kb on - strand, within QEN71_RS40730 at 206.464 kb on - strand, within QEN71_RS40730 at 206.464 kb on - strand, within QEN71_RS40730 at 206.464 kb on - strand, within QEN71_RS40730 at 206.465 kb on + strand, within QEN71_RS40730 at 206.465 kb on + strand, within QEN71_RS40730 at 206.466 kb on - strand, within QEN71_RS40730 at 206.466 kb on - strand, within QEN71_RS40730 at 206.466 kb on - strand, within QEN71_RS40730 at 206.466 kb on - strand, within QEN71_RS40730 at 206.481 kb on + strand, within QEN71_RS40730 at 206.775 kb on + strand, within QEN71_RS40730 at 206.880 kb on - strand, within QEN71_RS40730 at 206.936 kb on - strand, within QEN71_RS40730 at 206.939 kb on + strand, within QEN71_RS40730 at 206.940 kb on - strand, within QEN71_RS40730 at 206.940 kb on - strand, within QEN71_RS40730 at 206.943 kb on + strand, within QEN71_RS40730 at 206.943 kb on + strand, within QEN71_RS40730 at 206.943 kb on + strand, within QEN71_RS40730 at 206.944 kb on - strand, within QEN71_RS40730 at 206.992 kb on + strand at 206.993 kb on - strand at 206.993 kb on - strand at 207.000 kb on - strand at 207.097 kb on + strand at 207.097 kb on + strand at 207.098 kb on - strand at 207.143 kb on - strand at 207.193 kb on + strand at 207.225 kb on - strand at 207.306 kb on - strand, within QEN71_RS40735 at 207.306 kb on - strand, within QEN71_RS40735 at 207.306 kb on - strand, within QEN71_RS40735 at 207.356 kb on + strand, within QEN71_RS40735 at 207.519 kb on + strand, within QEN71_RS40735 at 207.519 kb on + strand, within QEN71_RS40735 at 207.519 kb on + strand, within QEN71_RS40735 at 207.520 kb on - strand, within QEN71_RS40735 at 207.520 kb on - strand, within QEN71_RS40735 at 207.520 kb on - strand, within QEN71_RS40735 at 207.746 kb on - strand, within QEN71_RS40735 at 207.749 kb on + strand, within QEN71_RS40735 at 207.824 kb on + strand, within QEN71_RS40735 at 207.825 kb on - strand, within QEN71_RS40735 at 208.084 kb on + strand, within QEN71_RS40735 at 208.084 kb on + strand, within QEN71_RS40735 at 208.122 kb on + strand, within QEN71_RS40735 at 208.123 kb on - strand, within QEN71_RS40735 at 208.123 kb on - strand, within QEN71_RS40735 at 208.159 kb on + strand, within QEN71_RS40735 at 208.160 kb on - strand, within QEN71_RS40735 at 208.160 kb on - strand, within QEN71_RS40735 at 208.396 kb on + strand at 208.396 kb on + strand at 208.396 kb on + strand at 208.396 kb on + strand at 208.397 kb on - strand at 208.397 kb on - strand at 208.474 kb on + strand at 208.475 kb on - strand at 208.477 kb on + strand at 208.477 kb on + strand at 208.549 kb on + strand at 208.629 kb on - strand, within QEN71_RS40740 at 208.756 kb on + strand, within QEN71_RS40740 at 208.804 kb on + strand, within QEN71_RS40740 at 208.804 kb on + strand, within QEN71_RS40740 at 208.805 kb on - strand, within QEN71_RS40740 at 208.866 kb on + strand, within QEN71_RS40740 at 209.080 kb on + strand, within QEN71_RS40740 at 209.094 kb on + strand, within QEN71_RS40740 at 209.094 kb on + strand, within QEN71_RS40740 at 209.094 kb on + strand, within QEN71_RS40740 at 209.094 kb on + strand, within QEN71_RS40740 at 209.095 kb on - strand, within QEN71_RS40740 at 209.096 kb on + strand, within QEN71_RS40740 at 209.097 kb on - strand, within QEN71_RS40740 at 209.171 kb on + strand, within QEN71_RS40740 at 209.172 kb on - strand, within QEN71_RS40740 at 209.269 kb on + strand, within QEN71_RS40740 at 209.271 kb on + strand, within QEN71_RS40740 at 209.271 kb on + strand, within QEN71_RS40740 at 209.272 kb on - strand, within QEN71_RS40740 at 209.274 kb on + strand, within QEN71_RS40740 at 209.274 kb on + strand, within QEN71_RS40740 at 209.275 kb on - strand, within QEN71_RS40740 at 209.355 kb on + strand, within QEN71_RS40740 at 209.356 kb on - strand, within QEN71_RS40740
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 206,247 + QEN71_RS40730 0.34 +0.5 206,310 - QEN71_RS40730 0.39 -2.8 206,419 + QEN71_RS40730 0.47 +0.5 206,442 + QEN71_RS40730 0.49 +0.5 206,444 + QEN71_RS40730 0.49 -0.9 206,463 + QEN71_RS40730 0.51 +0.7 206,463 + QEN71_RS40730 0.51 +0.6 206,464 - QEN71_RS40730 0.51 -0.5 206,464 - QEN71_RS40730 0.51 +0.2 206,464 - QEN71_RS40730 0.51 +1.1 206,464 - QEN71_RS40730 0.51 +0.4 206,465 + QEN71_RS40730 0.51 +0.0 206,465 + QEN71_RS40730 0.51 +1.6 206,466 - QEN71_RS40730 0.51 +0.6 206,466 - QEN71_RS40730 0.51 -0.6 206,466 - QEN71_RS40730 0.51 -0.0 206,466 - QEN71_RS40730 0.51 +0.7 206,481 + QEN71_RS40730 0.52 +0.9 206,775 + QEN71_RS40730 0.74 -1.1 206,880 - QEN71_RS40730 0.82 -0.8 206,936 - QEN71_RS40730 0.86 -0.4 206,939 + QEN71_RS40730 0.87 +0.2 206,940 - QEN71_RS40730 0.87 -1.5 206,940 - QEN71_RS40730 0.87 +1.3 206,943 + QEN71_RS40730 0.87 -0.6 206,943 + QEN71_RS40730 0.87 -0.1 206,943 + QEN71_RS40730 0.87 -0.0 206,944 - QEN71_RS40730 0.87 +0.7 206,992 + +1.0 206,993 - -0.3 206,993 - -1.8 207,000 - -1.3 207,097 + -0.3 207,097 + +0.2 207,098 - -1.1 207,143 - +0.1 207,193 + -1.2 207,225 - -1.3 207,306 - QEN71_RS40735 0.11 -0.2 207,306 - QEN71_RS40735 0.11 -0.0 207,306 - QEN71_RS40735 0.11 -0.1 207,356 + QEN71_RS40735 0.15 -0.1 207,519 + QEN71_RS40735 0.28 +2.5 207,519 + QEN71_RS40735 0.28 -0.5 207,519 + QEN71_RS40735 0.28 -0.8 207,520 - QEN71_RS40735 0.29 -0.4 207,520 - QEN71_RS40735 0.29 -0.8 207,520 - QEN71_RS40735 0.29 -0.2 207,746 - QEN71_RS40735 0.47 +2.0 207,749 + QEN71_RS40735 0.47 -2.1 207,824 + QEN71_RS40735 0.53 +0.4 207,825 - QEN71_RS40735 0.53 -0.3 208,084 + QEN71_RS40735 0.74 -1.3 208,084 + QEN71_RS40735 0.74 -0.6 208,122 + QEN71_RS40735 0.77 -1.6 208,123 - QEN71_RS40735 0.77 +0.6 208,123 - QEN71_RS40735 0.77 -0.3 208,159 + QEN71_RS40735 0.80 +1.0 208,160 - QEN71_RS40735 0.80 -0.8 208,160 - QEN71_RS40735 0.80 -0.2 208,396 + -0.1 208,396 + +0.7 208,396 + -0.0 208,396 + -0.5 208,397 - -0.2 208,397 - +0.1 208,474 + -1.5 208,475 - -0.6 208,477 + -0.4 208,477 + +0.2 208,549 + -1.8 208,629 - QEN71_RS40740 0.16 +1.1 208,756 + QEN71_RS40740 0.27 -0.2 208,804 + QEN71_RS40740 0.31 -0.2 208,804 + QEN71_RS40740 0.31 +0.1 208,805 - QEN71_RS40740 0.31 -1.3 208,866 + QEN71_RS40740 0.37 -0.2 209,080 + QEN71_RS40740 0.55 -0.1 209,094 + QEN71_RS40740 0.56 +1.0 209,094 + QEN71_RS40740 0.56 +0.1 209,094 + QEN71_RS40740 0.56 -0.5 209,094 + QEN71_RS40740 0.56 +1.0 209,095 - QEN71_RS40740 0.56 +0.1 209,096 + QEN71_RS40740 0.56 +0.5 209,097 - QEN71_RS40740 0.56 -1.2 209,171 + QEN71_RS40740 0.63 -1.5 209,172 - QEN71_RS40740 0.63 -0.3 209,269 + QEN71_RS40740 0.71 +0.3 209,271 + QEN71_RS40740 0.71 +0.1 209,271 + QEN71_RS40740 0.71 -0.5 209,272 - QEN71_RS40740 0.71 -0.0 209,274 + QEN71_RS40740 0.72 -0.0 209,274 + QEN71_RS40740 0.72 +1.1 209,275 - QEN71_RS40740 0.72 -0.7 209,355 + QEN71_RS40740 0.79 -1.2 209,356 - QEN71_RS40740 0.79 -0.1
Or see this region's nucleotide sequence