Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26115 and QEN71_RS26120 are separated by 151 nucleotides QEN71_RS26120 and QEN71_RS26125 are separated by 593 nucleotides
QEN71_RS26115: QEN71_RS26115 - aspartate-alanine antiporter, at 5,823,255 to 5,824,940
_RS26115
QEN71_RS26120: QEN71_RS26120 - aspartate-alanine antiporter, at 5,825,092 to 5,826,780
_RS26120
QEN71_RS26125: QEN71_RS26125 - LysR family transcriptional regulator, at 5,827,374 to 5,828,363
_RS26125
Position (kb) 5825
5826
5827 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.457 kb on - strand, within QEN71_RS26115 at 5824.732 kb on + strand, within QEN71_RS26115 at 5824.733 kb on - strand, within QEN71_RS26115 at 5824.733 kb on - strand, within QEN71_RS26115 at 5824.733 kb on - strand, within QEN71_RS26115 at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.870 kb on + strand at 5824.871 kb on - strand at 5824.899 kb on + strand at 5824.899 kb on + strand at 5824.899 kb on + strand at 5824.900 kb on - strand at 5824.900 kb on - strand at 5824.900 kb on - strand at 5824.900 kb on - strand at 5824.929 kb on + strand at 5824.930 kb on - strand at 5824.989 kb on + strand at 5824.989 kb on + strand at 5824.989 kb on + strand at 5824.989 kb on + strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.166 kb on - strand at 5825.166 kb on - strand at 5825.369 kb on + strand, within QEN71_RS26120 at 5825.663 kb on + strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.686 kb on + strand, within QEN71_RS26120 at 5825.686 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5826.074 kb on + strand, within QEN71_RS26120 at 5826.279 kb on + strand, within QEN71_RS26120 at 5826.293 kb on + strand, within QEN71_RS26120 at 5826.293 kb on + strand, within QEN71_RS26120 at 5826.294 kb on - strand, within QEN71_RS26120 at 5826.294 kb on - strand, within QEN71_RS26120 at 5826.294 kb on - strand, within QEN71_RS26120 at 5826.306 kb on - strand, within QEN71_RS26120 at 5826.306 kb on - strand, within QEN71_RS26120 at 5826.306 kb on - strand, within QEN71_RS26120 at 5826.606 kb on + strand, within QEN71_RS26120 at 5826.606 kb on + strand, within QEN71_RS26120 at 5826.606 kb on + strand, within QEN71_RS26120 at 5826.606 kb on + strand, within QEN71_RS26120 at 5826.607 kb on - strand, within QEN71_RS26120 at 5826.607 kb on - strand, within QEN71_RS26120 at 5826.607 kb on - strand, within QEN71_RS26120 at 5826.607 kb on - strand, within QEN71_RS26120 at 5826.607 kb on - strand, within QEN71_RS26120 at 5826.679 kb on + strand at 5826.679 kb on + strand at 5826.679 kb on + strand at 5826.679 kb on + strand at 5826.679 kb on + strand at 5826.679 kb on + strand at 5826.679 kb on + strand at 5826.680 kb on - strand at 5826.680 kb on - strand at 5826.745 kb on + strand at 5826.746 kb on - strand at 5826.762 kb on + strand at 5826.762 kb on + strand at 5826.763 kb on - strand at 5826.811 kb on + strand at 5826.812 kb on - strand at 5826.812 kb on - strand at 5826.857 kb on + strand at 5826.920 kb on + strand at 5826.921 kb on - strand at 5826.976 kb on + strand at 5826.976 kb on + strand at 5826.976 kb on + strand at 5827.108 kb on + strand at 5827.151 kb on - strand at 5827.192 kb on + strand at 5827.193 kb on - strand at 5827.220 kb on + strand at 5827.269 kb on + strand at 5827.269 kb on + strand at 5827.269 kb on + strand at 5827.269 kb on + strand at 5827.269 kb on + strand at 5827.269 kb on + strand at 5827.269 kb on + strand at 5827.270 kb on - strand at 5827.386 kb on + strand at 5827.386 kb on + strand at 5827.386 kb on + strand at 5827.386 kb on + strand at 5827.386 kb on + strand at 5827.386 kb on + strand at 5827.387 kb on - strand at 5827.387 kb on - strand at 5827.387 kb on - strand at 5827.566 kb on + strand, within QEN71_RS26125 at 5827.566 kb on + strand, within QEN71_RS26125 at 5827.566 kb on + strand, within QEN71_RS26125 at 5827.566 kb on + strand, within QEN71_RS26125 at 5827.567 kb on - strand, within QEN71_RS26125
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 5,824,444 + QEN71_RS26115 0.71 -1.1 5,824,444 + QEN71_RS26115 0.71 +0.5 5,824,444 + QEN71_RS26115 0.71 +0.4 5,824,444 + QEN71_RS26115 0.71 +1.2 5,824,444 + QEN71_RS26115 0.71 +0.6 5,824,444 + QEN71_RS26115 0.71 -0.2 5,824,444 + QEN71_RS26115 0.71 -0.8 5,824,444 + QEN71_RS26115 0.71 +0.0 5,824,444 + QEN71_RS26115 0.71 -1.3 5,824,444 + QEN71_RS26115 0.71 -0.5 5,824,444 + QEN71_RS26115 0.71 -0.7 5,824,445 - QEN71_RS26115 0.71 -0.0 5,824,445 - QEN71_RS26115 0.71 +0.1 5,824,445 - QEN71_RS26115 0.71 +0.1 5,824,445 - QEN71_RS26115 0.71 -0.1 5,824,457 - QEN71_RS26115 0.71 +0.0 5,824,732 + QEN71_RS26115 0.88 -0.5 5,824,733 - QEN71_RS26115 0.88 +0.1 5,824,733 - QEN71_RS26115 0.88 -2.1 5,824,733 - QEN71_RS26115 0.88 -0.8 5,824,867 + -1.6 5,824,867 + +0.3 5,824,867 + +0.3 5,824,867 + -0.6 5,824,867 + +0.6 5,824,867 + +1.1 5,824,867 + -1.5 5,824,868 - -0.9 5,824,868 - +0.5 5,824,868 - -0.1 5,824,868 - +0.2 5,824,868 - -1.7 5,824,868 - +0.3 5,824,868 - +0.1 5,824,868 - -0.2 5,824,870 + +1.1 5,824,871 - -0.7 5,824,899 + +0.8 5,824,899 + -1.0 5,824,899 + -0.7 5,824,900 - -0.2 5,824,900 - -1.6 5,824,900 - +1.3 5,824,900 - +0.5 5,824,929 + +0.5 5,824,930 - +0.1 5,824,989 + -0.5 5,824,989 + +0.1 5,824,989 + +0.5 5,824,989 + +0.3 5,824,990 - +0.9 5,824,990 - +0.1 5,824,990 - +0.0 5,824,990 - +0.1 5,824,990 - +0.8 5,824,990 - -0.4 5,824,990 - +0.1 5,824,990 - +0.2 5,824,990 - +0.6 5,824,990 - -0.1 5,825,165 + +0.8 5,825,165 + -0.3 5,825,165 + -0.4 5,825,165 + +0.1 5,825,165 + +0.2 5,825,166 - +1.4 5,825,166 - +0.2 5,825,369 + QEN71_RS26120 0.16 -0.2 5,825,663 + QEN71_RS26120 0.34 +0.3 5,825,664 - QEN71_RS26120 0.34 +0.4 5,825,664 - QEN71_RS26120 0.34 +0.1 5,825,664 - QEN71_RS26120 0.34 +0.0 5,825,664 - QEN71_RS26120 0.34 -0.9 5,825,664 - QEN71_RS26120 0.34 +0.3 5,825,686 + QEN71_RS26120 0.35 -0.2 5,825,686 + QEN71_RS26120 0.35 -1.2 5,825,792 + QEN71_RS26120 0.41 +0.5 5,825,792 + QEN71_RS26120 0.41 +1.0 5,825,792 + QEN71_RS26120 0.41 +0.1 5,825,792 + QEN71_RS26120 0.41 -1.0 5,825,792 + QEN71_RS26120 0.41 +0.5 5,825,792 + QEN71_RS26120 0.41 -1.2 5,825,792 + QEN71_RS26120 0.41 -0.6 5,825,793 - QEN71_RS26120 0.42 -0.7 5,825,793 - QEN71_RS26120 0.42 -0.2 5,825,793 - QEN71_RS26120 0.42 +0.5 5,825,793 - QEN71_RS26120 0.42 +0.1 5,825,793 - QEN71_RS26120 0.42 +0.5 5,825,793 - QEN71_RS26120 0.42 -0.9 5,825,793 - QEN71_RS26120 0.42 +1.5 5,825,793 - QEN71_RS26120 0.42 +0.5 5,826,074 + QEN71_RS26120 0.58 +0.5 5,826,279 + QEN71_RS26120 0.70 -0.2 5,826,293 + QEN71_RS26120 0.71 -1.0 5,826,293 + QEN71_RS26120 0.71 -0.8 5,826,294 - QEN71_RS26120 0.71 +0.3 5,826,294 - QEN71_RS26120 0.71 +0.1 5,826,294 - QEN71_RS26120 0.71 -0.2 5,826,306 - QEN71_RS26120 0.72 +0.1 5,826,306 - QEN71_RS26120 0.72 -0.4 5,826,306 - QEN71_RS26120 0.72 -0.5 5,826,606 + QEN71_RS26120 0.90 -0.2 5,826,606 + QEN71_RS26120 0.90 -0.2 5,826,606 + QEN71_RS26120 0.90 +2.8 5,826,606 + QEN71_RS26120 0.90 -0.0 5,826,607 - QEN71_RS26120 0.90 -0.1 5,826,607 - QEN71_RS26120 0.90 -0.7 5,826,607 - QEN71_RS26120 0.90 -0.5 5,826,607 - QEN71_RS26120 0.90 +0.3 5,826,607 - QEN71_RS26120 0.90 -0.3 5,826,679 + -1.0 5,826,679 + +0.5 5,826,679 + -0.2 5,826,679 + -1.2 5,826,679 + -3.2 5,826,679 + +0.1 5,826,679 + -1.1 5,826,680 - -0.8 5,826,680 - -0.9 5,826,745 + -0.1 5,826,746 - +0.5 5,826,762 + -0.1 5,826,762 + -1.8 5,826,763 - +0.5 5,826,811 + +0.0 5,826,812 - +0.4 5,826,812 - -0.5 5,826,857 + +1.4 5,826,920 + -0.3 5,826,921 - +0.1 5,826,976 + -0.4 5,826,976 + +0.5 5,826,976 + -0.0 5,827,108 + -0.3 5,827,151 - -0.3 5,827,192 + -1.0 5,827,193 - +0.9 5,827,220 + -0.7 5,827,269 + +0.8 5,827,269 + -0.5 5,827,269 + -0.4 5,827,269 + +0.0 5,827,269 + -0.9 5,827,269 + -0.3 5,827,269 + +0.9 5,827,270 - -0.5 5,827,386 + -0.5 5,827,386 + -0.3 5,827,386 + -1.6 5,827,386 + +0.1 5,827,386 + +0.3 5,827,386 + -0.3 5,827,387 - -1.5 5,827,387 - -1.3 5,827,387 - +0.6 5,827,566 + QEN71_RS26125 0.19 -0.4 5,827,566 + QEN71_RS26125 0.19 -0.9 5,827,566 + QEN71_RS26125 0.19 -0.2 5,827,566 + QEN71_RS26125 0.19 +1.7 5,827,567 - QEN71_RS26125 0.19 +0.1
Or see this region's nucleotide sequence