Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04490 and QEN71_RS04495 are separated by 172 nucleotides QEN71_RS04495 and QEN71_RS04500 are separated by 762 nucleotides
QEN71_RS04490: QEN71_RS04490 - GTP 3',8-cyclase MoaA, at 986,020 to 987,132
_RS04490
QEN71_RS04495: QEN71_RS04495 - Rne/Rng family ribonuclease, at 987,305 to 990,598
_RS04495
QEN71_RS04500: QEN71_RS04500 - RluA family pseudouridine synthase, at 991,361 to 992,422
_RS04500
Position (kb) 987
988
989
990
991 Strain fitness (log2 ratio) -2
-1
0
1
2 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.462 kb on + strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.463 kb on - strand, within QEN71_RS04490 at 986.650 kb on + strand, within QEN71_RS04490 at 986.651 kb on - strand, within QEN71_RS04490 at 986.881 kb on + strand, within QEN71_RS04490 at 986.881 kb on + strand, within QEN71_RS04490 at 986.881 kb on + strand, within QEN71_RS04490 at 986.881 kb on + strand, within QEN71_RS04490 at 986.882 kb on - strand, within QEN71_RS04490 at 986.882 kb on - strand, within QEN71_RS04490 at 986.883 kb on + strand, within QEN71_RS04490 at 986.883 kb on + strand, within QEN71_RS04490 at 986.883 kb on + strand, within QEN71_RS04490 at 986.883 kb on + strand, within QEN71_RS04490 at 986.883 kb on + strand, within QEN71_RS04490 at 986.884 kb on - strand, within QEN71_RS04490 at 986.910 kb on - strand, within QEN71_RS04490 at 986.942 kb on + strand, within QEN71_RS04490 at 986.942 kb on + strand, within QEN71_RS04490 at 986.942 kb on + strand, within QEN71_RS04490 at 986.942 kb on + strand, within QEN71_RS04490 at 986.975 kb on + strand, within QEN71_RS04490 at 986.975 kb on + strand, within QEN71_RS04490 at 986.975 kb on + strand, within QEN71_RS04490 at 986.975 kb on + strand, within QEN71_RS04490 at 986.975 kb on + strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 986.976 kb on - strand, within QEN71_RS04490 at 987.010 kb on + strand, within QEN71_RS04490 at 987.010 kb on + strand, within QEN71_RS04490 at 987.010 kb on + strand, within QEN71_RS04490 at 987.011 kb on - strand, within QEN71_RS04490 at 987.011 kb on - strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.012 kb on + strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.013 kb on - strand, within QEN71_RS04490 at 987.042 kb on + strand at 987.042 kb on + strand at 987.042 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.140 kb on + strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.141 kb on - strand at 987.164 kb on + strand at 987.165 kb on - strand at 987.189 kb on + strand at 987.189 kb on + strand at 987.217 kb on - strand at 987.271 kb on - strand at 987.306 kb on + strand at 987.446 kb on - strand at 987.748 kb on + strand, within QEN71_RS04495 at 987.749 kb on - strand, within QEN71_RS04495 at 987.749 kb on - strand, within QEN71_RS04495 at 987.773 kb on - strand, within QEN71_RS04495 at 990.694 kb on - strand at 991.252 kb on - strand at 991.252 kb on - strand at 991.252 kb on - strand at 991.252 kb on - strand at 991.257 kb on - strand at 991.266 kb on - strand at 991.266 kb on - strand at 991.304 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.318 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.320 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.322 kb on - strand at 991.352 kb on - strand at 991.352 kb on - strand at 991.352 kb on - strand at 991.353 kb on + strand at 991.353 kb on + strand at 991.353 kb on + strand at 991.354 kb on - strand at 991.354 kb on - strand at 991.354 kb on - strand at 991.354 kb on - strand at 991.372 kb on - strand at 991.435 kb on - strand at 991.486 kb on + strand, within QEN71_RS04500 at 991.486 kb on + strand, within QEN71_RS04500 at 991.486 kb on + strand, within QEN71_RS04500 at 991.486 kb on + strand, within QEN71_RS04500 at 991.486 kb on + strand, within QEN71_RS04500 at 991.487 kb on - strand, within QEN71_RS04500 at 991.507 kb on + strand, within QEN71_RS04500 at 991.507 kb on + strand, within QEN71_RS04500 at 991.507 kb on + strand, within QEN71_RS04500 at 991.507 kb on + strand, within QEN71_RS04500 at 991.507 kb on + strand, within QEN71_RS04500 at 991.507 kb on + strand, within QEN71_RS04500 at 991.508 kb on - strand, within QEN71_RS04500 at 991.508 kb on - strand, within QEN71_RS04500 at 991.508 kb on - strand, within QEN71_RS04500 at 991.508 kb on - strand, within QEN71_RS04500 at 991.512 kb on - strand, within QEN71_RS04500 at 991.536 kb on + strand, within QEN71_RS04500 at 991.536 kb on + strand, within QEN71_RS04500 at 991.536 kb on + strand, within QEN71_RS04500 at 991.536 kb on + strand, within QEN71_RS04500 at 991.537 kb on + strand, within QEN71_RS04500 at 991.537 kb on - strand, within QEN71_RS04500 at 991.537 kb on - strand, within QEN71_RS04500 at 991.537 kb on - strand, within QEN71_RS04500 at 991.568 kb on + strand, within QEN71_RS04500 at 991.569 kb on - strand, within QEN71_RS04500 at 991.580 kb on + strand, within QEN71_RS04500 at 991.580 kb on + strand, within QEN71_RS04500 at 991.581 kb on - strand, within QEN71_RS04500 at 991.581 kb on - strand, within QEN71_RS04500
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 986,462 + QEN71_RS04490 0.40 -1.2 986,462 + QEN71_RS04490 0.40 +0.7 986,462 + QEN71_RS04490 0.40 +0.3 986,462 + QEN71_RS04490 0.40 +0.5 986,462 + QEN71_RS04490 0.40 +0.1 986,462 + QEN71_RS04490 0.40 +0.1 986,462 + QEN71_RS04490 0.40 +0.9 986,462 + QEN71_RS04490 0.40 +0.5 986,462 + QEN71_RS04490 0.40 +0.0 986,463 - QEN71_RS04490 0.40 +0.5 986,463 - QEN71_RS04490 0.40 -0.1 986,463 - QEN71_RS04490 0.40 -0.3 986,463 - QEN71_RS04490 0.40 +1.5 986,463 - QEN71_RS04490 0.40 +1.6 986,463 - QEN71_RS04490 0.40 +0.3 986,463 - QEN71_RS04490 0.40 -0.8 986,463 - QEN71_RS04490 0.40 -0.3 986,463 - QEN71_RS04490 0.40 +1.1 986,463 - QEN71_RS04490 0.40 -0.2 986,463 - QEN71_RS04490 0.40 +0.4 986,463 - QEN71_RS04490 0.40 +0.4 986,463 - QEN71_RS04490 0.40 -1.1 986,463 - QEN71_RS04490 0.40 +1.1 986,463 - QEN71_RS04490 0.40 -1.3 986,650 + QEN71_RS04490 0.57 -1.0 986,651 - QEN71_RS04490 0.57 -2.1 986,881 + QEN71_RS04490 0.77 +0.1 986,881 + QEN71_RS04490 0.77 -0.5 986,881 + QEN71_RS04490 0.77 -0.7 986,881 + QEN71_RS04490 0.77 +0.5 986,882 - QEN71_RS04490 0.77 -0.2 986,882 - QEN71_RS04490 0.77 +0.3 986,883 + QEN71_RS04490 0.78 -0.9 986,883 + QEN71_RS04490 0.78 +1.7 986,883 + QEN71_RS04490 0.78 +0.1 986,883 + QEN71_RS04490 0.78 -1.3 986,883 + QEN71_RS04490 0.78 +1.8 986,884 - QEN71_RS04490 0.78 -0.2 986,910 - QEN71_RS04490 0.80 -2.3 986,942 + QEN71_RS04490 0.83 -0.1 986,942 + QEN71_RS04490 0.83 -0.8 986,942 + QEN71_RS04490 0.83 +0.5 986,942 + QEN71_RS04490 0.83 +0.1 986,975 + QEN71_RS04490 0.86 -0.0 986,975 + QEN71_RS04490 0.86 -0.6 986,975 + QEN71_RS04490 0.86 +0.1 986,975 + QEN71_RS04490 0.86 +0.8 986,975 + QEN71_RS04490 0.86 -0.7 986,976 - QEN71_RS04490 0.86 -2.1 986,976 - QEN71_RS04490 0.86 +0.9 986,976 - QEN71_RS04490 0.86 -0.1 986,976 - QEN71_RS04490 0.86 +0.8 986,976 - QEN71_RS04490 0.86 -1.0 986,976 - QEN71_RS04490 0.86 -0.2 986,976 - QEN71_RS04490 0.86 -0.4 986,976 - QEN71_RS04490 0.86 -1.5 987,010 + QEN71_RS04490 0.89 -0.7 987,010 + QEN71_RS04490 0.89 +2.2 987,010 + QEN71_RS04490 0.89 -0.7 987,011 - QEN71_RS04490 0.89 -0.1 987,011 - QEN71_RS04490 0.89 -0.7 987,012 + QEN71_RS04490 0.89 -0.8 987,012 + QEN71_RS04490 0.89 -0.1 987,012 + QEN71_RS04490 0.89 -0.0 987,012 + QEN71_RS04490 0.89 +0.9 987,012 + QEN71_RS04490 0.89 -0.7 987,012 + QEN71_RS04490 0.89 -0.4 987,012 + QEN71_RS04490 0.89 +0.8 987,012 + QEN71_RS04490 0.89 +0.1 987,012 + QEN71_RS04490 0.89 +0.3 987,013 - QEN71_RS04490 0.89 -0.8 987,013 - QEN71_RS04490 0.89 -0.3 987,013 - QEN71_RS04490 0.89 -0.3 987,013 - QEN71_RS04490 0.89 +0.7 987,013 - QEN71_RS04490 0.89 -1.2 987,013 - QEN71_RS04490 0.89 -0.1 987,013 - QEN71_RS04490 0.89 -0.1 987,013 - QEN71_RS04490 0.89 +0.3 987,013 - QEN71_RS04490 0.89 +0.3 987,042 + -1.1 987,042 + +1.0 987,042 + -2.1 987,140 + -0.1 987,140 + +0.1 987,140 + -0.6 987,140 + -0.2 987,140 + -0.2 987,140 + +0.5 987,140 + +0.1 987,140 + +2.7 987,140 + +0.3 987,140 + +1.5 987,141 - +0.1 987,141 - -0.5 987,141 - -1.9 987,141 - +0.2 987,141 - -0.5 987,141 - -1.6 987,141 - -0.4 987,141 - -0.2 987,141 - +0.2 987,141 - +0.2 987,164 + -2.2 987,165 - -0.9 987,189 + -0.4 987,189 + +0.8 987,217 - -0.5 987,271 - -0.9 987,306 + -0.1 987,446 - -0.5 987,748 + QEN71_RS04495 0.13 +0.2 987,749 - QEN71_RS04495 0.13 -1.2 987,749 - QEN71_RS04495 0.13 -0.5 987,773 - QEN71_RS04495 0.14 -1.4 990,694 - -0.5 991,252 - -0.4 991,252 - +0.1 991,252 - -1.1 991,252 - -1.8 991,257 - +0.5 991,266 - -1.7 991,266 - -1.7 991,304 - -1.4 991,318 - -0.8 991,318 - -0.4 991,318 - +0.1 991,318 - -0.1 991,318 - -1.2 991,318 - +0.2 991,318 - -0.1 991,318 - -0.1 991,318 - -1.2 991,318 - -0.9 991,318 - -1.0 991,318 - +0.8 991,318 - +0.0 991,318 - -1.8 991,318 - +0.1 991,318 - -1.1 991,318 - -0.3 991,318 - -1.9 991,320 - -0.8 991,320 - -0.3 991,320 - -0.2 991,320 - +0.5 991,320 - +0.2 991,320 - -0.7 991,320 - -0.4 991,320 - +0.4 991,322 - -1.6 991,322 - +1.2 991,322 - -1.3 991,322 - -0.3 991,322 - -0.7 991,322 - -0.6 991,322 - -1.1 991,322 - -0.1 991,322 - +0.1 991,322 - +1.2 991,352 - -0.2 991,352 - -1.0 991,352 - -1.1 991,353 + +0.2 991,353 + -0.5 991,353 + +0.5 991,354 - +0.5 991,354 - -0.5 991,354 - -1.1 991,354 - -0.6 991,372 - -0.1 991,435 - -1.6 991,486 + QEN71_RS04500 0.12 +0.1 991,486 + QEN71_RS04500 0.12 -0.3 991,486 + QEN71_RS04500 0.12 +0.2 991,486 + QEN71_RS04500 0.12 -0.2 991,486 + QEN71_RS04500 0.12 -0.5 991,487 - QEN71_RS04500 0.12 +0.8 991,507 + QEN71_RS04500 0.14 +0.2 991,507 + QEN71_RS04500 0.14 +0.2 991,507 + QEN71_RS04500 0.14 -1.8 991,507 + QEN71_RS04500 0.14 -0.1 991,507 + QEN71_RS04500 0.14 -0.8 991,507 + QEN71_RS04500 0.14 +0.5 991,508 - QEN71_RS04500 0.14 +0.9 991,508 - QEN71_RS04500 0.14 -0.9 991,508 - QEN71_RS04500 0.14 -0.4 991,508 - QEN71_RS04500 0.14 -0.7 991,512 - QEN71_RS04500 0.14 +0.1 991,536 + QEN71_RS04500 0.16 -0.4 991,536 + QEN71_RS04500 0.16 -0.0 991,536 + QEN71_RS04500 0.16 -1.8 991,536 + QEN71_RS04500 0.16 +0.1 991,537 + QEN71_RS04500 0.17 -0.9 991,537 - QEN71_RS04500 0.17 -0.7 991,537 - QEN71_RS04500 0.17 +0.1 991,537 - QEN71_RS04500 0.17 +0.1 991,568 + QEN71_RS04500 0.19 +0.1 991,569 - QEN71_RS04500 0.20 -0.6 991,580 + QEN71_RS04500 0.21 +0.7 991,580 + QEN71_RS04500 0.21 -0.8 991,581 - QEN71_RS04500 0.21 -0.0 991,581 - QEN71_RS04500 0.21 -2.1
Or see this region's nucleotide sequence