Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03978

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,465,447	-		MIT1002_03977	0.38	-2.9
4,465,509	-		MIT1002_03977	0.42	-1.4
4,465,672	+		MIT1002_03977	0.52	-0.1
4,465,716	+		MIT1002_03977	0.55	-2.9
4,465,716	+		MIT1002_03977	0.55	+0.4
4,465,719	-		MIT1002_03977	0.55	-0.6
4,465,824	+		MIT1002_03977	0.62	-0.3
4,465,840	+		MIT1002_03977	0.63	-1.4
4,465,848	-		MIT1002_03977	0.64	-1.8
4,465,870	+		MIT1002_03977	0.65	-0.1
4,465,986	-		MIT1002_03977	0.72	-0.6
4,465,994	-		MIT1002_03977	0.73	+0.4
4,466,035	-		MIT1002_03977	0.75	-0.3
4,466,362	+				+0.4
4,466,395	-				-0.1
4,466,475	+				-0.3
4,466,583	-		MIT1002_03978	0.13	+0.1
4,466,634	+		MIT1002_03978	0.18	+0.1
4,466,649	-		MIT1002_03978	0.19	-1.2
4,466,768	-		MIT1002_03978	0.28	+0.4
4,466,859	+		MIT1002_03978	0.36	-2.4
4,466,867	-		MIT1002_03978	0.37	+0.7
4,466,886	+		MIT1002_03978	0.38	-1.3
4,466,970	+		MIT1002_03978	0.45	-0.7
4,467,042	-		MIT1002_03978	0.51	-0.4
4,467,198	-		MIT1002_03978	0.63	-0.1
4,467,198	-		MIT1002_03978	0.63	-1.8
4,467,236	-		MIT1002_03978	0.67	-0.4
4,467,242	+		MIT1002_03978	0.67	-1.9
4,467,288	+		MIT1002_03978	0.71	-1.8
4,467,358	+		MIT1002_03978	0.77	-3.8
4,467,394	+		MIT1002_03978	0.79	-0.7
4,467,394	+		MIT1002_03978	0.79	-0.1
4,467,575	+				+0.7
4,467,687	+				+0.1
4,467,855	-		MIT1002_03979	0.48	-0.6
4,467,867	-		MIT1002_03979	0.51	-1.7
4,467,905	+		MIT1002_03979	0.59	-0.6
4,468,084	-				-2.6
4,468,185	-		MIT1002_03980	0.15	-0.7
4,468,185	-		MIT1002_03980	0.15	-0.9
4,468,317	-		MIT1002_03980	0.37	-0.7
4,468,415	-		MIT1002_03980	0.52	-0.3
4,468,622	+		MIT1002_03980	0.85	-0.3
4,468,643	+		MIT1002_03980	0.89	-0.1
4,468,643	+		MIT1002_03980	0.89	-1.6