Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03962

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,445,769	-		MIT1002_03961	0.60	-2.7
4,445,832	+		MIT1002_03961	0.65	-5.2
4,445,838	+		MIT1002_03961	0.66	+0.1
4,445,854	-		MIT1002_03961	0.67	-4.5
4,445,888	+		MIT1002_03961	0.69	+0.1
4,445,928	-		MIT1002_03961	0.72	-3.3
4,445,930	-		MIT1002_03961	0.73	-0.3
4,445,940	-		MIT1002_03961	0.73	-2.2
4,445,964	+		MIT1002_03961	0.75	-2.7
4,445,964	+		MIT1002_03961	0.75	-4.2
4,445,983	+		MIT1002_03961	0.77	-3.4
4,445,988	+		MIT1002_03961	0.77	-3.5
4,445,988	+		MIT1002_03961	0.77	-2.5
4,445,988	+		MIT1002_03961	0.77	-6.3
4,445,988	+		MIT1002_03961	0.77	-3.9
4,445,988	+		MIT1002_03961	0.77	-3.4
4,445,988	+		MIT1002_03961	0.77	-1.0
4,445,996	-		MIT1002_03961	0.78	-2.4
4,445,996	-		MIT1002_03961	0.78	-3.8
4,445,996	-		MIT1002_03961	0.78	-1.9
4,445,996	-		MIT1002_03961	0.78	-2.5
4,445,996	-		MIT1002_03961	0.78	-1.4
4,446,015	-		MIT1002_03961	0.79	-4.4
4,446,073	-		MIT1002_03961	0.84	-1.0
4,446,099	-		MIT1002_03961	0.86	-2.8
4,446,101	+		MIT1002_03961	0.86	-3.9
4,446,121	+		MIT1002_03961	0.87	-6.1
4,446,123	+		MIT1002_03961	0.88	-5.1
4,446,131	-		MIT1002_03961	0.88	-1.7
4,446,160	-				-4.4
4,446,189	+				-9.2
4,446,199	+				-3.5
4,446,199	+				-0.3
4,446,207	-				-3.4
4,446,214	+				-3.2
4,446,214	+				+0.1
4,446,222	-				-1.1
4,446,234	-				-3.9
4,446,277	-				-2.4
4,446,283	+				-0.1
4,446,318	+				-0.8
4,446,318	+				+0.4
4,446,326	-				+1.4
4,446,326	-				-1.5
4,446,326	-				-0.1
4,446,326	-				-1.2
4,446,326	-				-1.6
4,446,326	-				-1.2
4,446,326	-				+1.4
4,446,378	+				+0.0
4,446,378	+				-1.8
4,446,378	+				+1.2
4,446,378	+				+2.2
4,446,378	+				-0.5
4,446,378	+				-1.4
4,446,378	+				-1.1
4,446,378	+				-0.1
4,446,378	+				+0.8
4,446,386	-				+1.0
4,446,386	-				+0.9
4,446,386	-				+0.0
4,446,386	-				-0.6
4,446,386	-				+1.2
4,446,386	-				+1.5
4,446,386	-				+0.0
4,446,386	-				+0.2
4,446,386	-				-1.1
4,446,386	-				-0.1
4,446,461	+				-0.2
4,446,469	-				+2.7
4,446,471	-				+1.7
4,446,484	-				-0.9
4,446,515	-				+1.7
4,446,579	+				-0.4
4,446,587	-				-0.9
4,446,604	+				-0.3
4,446,612	-				-0.6
4,446,613	-				-1.1
4,446,694	+				+1.7
4,446,739	+				+0.0
4,446,739	+				-0.3
4,446,764	+				-0.7
4,446,764	+				+0.9
4,446,764	+				+0.4
4,446,765	-				+0.9
4,446,794	+				+0.5
4,446,807	-				+0.3
4,446,837	+		MIT1002_03962	0.12	+0.7
4,446,872	-		MIT1002_03962	0.16	+0.4
4,446,873	-		MIT1002_03962	0.16	+0.9
4,446,927	+		MIT1002_03962	0.24	+0.4
4,446,985	+		MIT1002_03962	0.31	+0.4
4,446,985	+		MIT1002_03962	0.31	+0.3
4,446,985	+		MIT1002_03962	0.31	+0.0
4,447,003	-		MIT1002_03962	0.34	-0.4
4,447,003	-		MIT1002_03962	0.34	-0.1
4,447,038	+		MIT1002_03962	0.38	-0.5
4,447,119	+		MIT1002_03962	0.49	+0.8
4,447,129	+		MIT1002_03962	0.50	+0.9
4,447,185	-		MIT1002_03962	0.58	-0.5
4,447,251	+		MIT1002_03962	0.67	-0.5
4,447,263	+		MIT1002_03962	0.68	-0.1
4,447,263	+		MIT1002_03962	0.68	+0.1
4,447,270	+		MIT1002_03962	0.69	+0.3
4,447,271	-		MIT1002_03962	0.69	+0.0
4,447,351	-		MIT1002_03962	0.80	-0.8
4,447,386	-		MIT1002_03962	0.84	+0.6
4,447,465	+				+0.8
4,447,465	+				-1.3
4,447,465	+				+0.0
4,447,473	-				+0.2
4,447,473	-				-0.1
4,447,501	+				+0.7
4,447,524	-				-1.7
4,447,577	-				-1.5
4,447,588	+				+0.0
4,447,690	-				-0.3
4,447,743	-				-1.7
4,447,813	+		MIT1002_03963	0.19	+1.0
4,447,820	+		MIT1002_03963	0.19	+0.7
4,447,826	-		MIT1002_03963	0.20	-0.5
4,447,826	-		MIT1002_03963	0.20	+1.1
4,447,930	-		MIT1002_03963	0.34	+0.1
4,447,975	+		MIT1002_03963	0.40	+0.0
4,447,980	+		MIT1002_03963	0.40	-0.5
4,447,998	-		MIT1002_03963	0.43	-0.5
4,448,037	-		MIT1002_03963	0.48	-0.1
4,448,140	+		MIT1002_03963	0.61	-1.5
4,448,251	+		MIT1002_03963	0.76	+0.3
4,448,259	-		MIT1002_03963	0.77	+0.3
4,448,311	+		MIT1002_03963	0.84	+0.7
4,448,311	+		MIT1002_03963	0.84	+0.1
4,448,319	-		MIT1002_03963	0.85	+1.2
4,448,351	+		MIT1002_03963	0.89	-0.1
4,448,359	-				+0.2
4,448,391	+				-1.3
4,448,399	-				+0.6
4,448,399	-				-1.2
4,448,406	-				+0.4
4,448,406	-				+0.4
4,448,406	-				+0.3
4,448,410	+				+0.1
4,448,426	-				+0.4