Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03791

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,237,138	-		MIT1002_03790	0.53	-0.6
4,237,178	-		MIT1002_03790	0.55	-0.9
4,237,178	-		MIT1002_03790	0.55	-1.0
4,237,180	+		MIT1002_03790	0.55	-0.9
4,237,188	-		MIT1002_03790	0.55	+0.2
4,237,237	+		MIT1002_03790	0.58	-1.3
4,237,237	+		MIT1002_03790	0.58	-0.6
4,237,276	-		MIT1002_03790	0.60	+1.2
4,237,321	+		MIT1002_03790	0.63	+1.1
4,237,321	+		MIT1002_03790	0.63	-1.6
4,237,321	+		MIT1002_03790	0.63	-0.5
4,237,329	-		MIT1002_03790	0.63	-0.5
4,237,329	-		MIT1002_03790	0.63	-0.5
4,237,329	-		MIT1002_03790	0.63	+1.0
4,237,331	-		MIT1002_03790	0.63	+0.2
4,237,341	-		MIT1002_03790	0.64	+0.9
4,237,341	-		MIT1002_03790	0.64	-0.9
4,237,358	-		MIT1002_03790	0.65	+0.4
4,237,463	+		MIT1002_03790	0.70	-2.7
4,237,471	-		MIT1002_03790	0.71	-0.6
4,237,473	+		MIT1002_03790	0.71	+0.5
4,237,473	+		MIT1002_03790	0.71	-0.3
4,237,473	+		MIT1002_03790	0.71	-0.4
4,237,473	+		MIT1002_03790	0.71	+0.2
4,237,473	+		MIT1002_03790	0.71	-0.6
4,237,473	+		MIT1002_03790	0.71	-0.8
4,237,478	+		MIT1002_03790	0.71	-1.7
4,237,481	-		MIT1002_03790	0.71	-0.3
4,237,481	-		MIT1002_03790	0.71	+2.0
4,237,481	-		MIT1002_03790	0.71	-0.4
4,237,481	-		MIT1002_03790	0.71	-1.4
4,237,481	-		MIT1002_03790	0.71	-1.5
4,237,481	-		MIT1002_03790	0.71	-1.4
4,237,481	-		MIT1002_03790	0.71	-1.0
4,237,481	-		MIT1002_03790	0.71	-0.1
4,237,481	-		MIT1002_03790	0.71	-0.6
4,237,488	+		MIT1002_03790	0.72	-1.3
4,237,663	+		MIT1002_03790	0.81	-0.3
4,237,663	+		MIT1002_03790	0.81	-0.1
4,237,671	-		MIT1002_03790	0.81	-0.2
4,237,671	-		MIT1002_03790	0.81	+1.5
4,237,671	-		MIT1002_03790	0.81	+0.6
4,237,688	+		MIT1002_03790	0.82	+0.9
4,237,706	+		MIT1002_03790	0.83	+3.1
4,237,837	-				+0.6
4,237,950	+				+0.8
4,237,959	+				+0.4
4,237,967	-				-1.6
4,237,996	+				+0.1
4,238,017	+				-1.8
4,238,017	+				-1.0
4,238,024	+				-2.7
4,238,068	-				+0.6
4,238,130	+				-1.7
4,238,182	-				-1.4
4,238,198	+				-3.0
4,238,198	+				-1.3
4,238,206	-				-0.0
4,238,213	+				-1.2
4,238,268	+		MIT1002_03791	0.12	-2.5
4,238,280	+		MIT1002_03791	0.13	-4.2
4,238,329	-		MIT1002_03791	0.16	-2.6
4,238,363	-		MIT1002_03791	0.19	-0.3
4,238,365	+		MIT1002_03791	0.19	-0.4
4,238,494	-		MIT1002_03791	0.28	-1.8
4,238,551	-		MIT1002_03791	0.33	+0.4
4,238,580	+		MIT1002_03791	0.35	-2.6
4,238,616	-		MIT1002_03791	0.37	-1.1
4,238,616	-		MIT1002_03791	0.37	-2.4
4,238,673	-		MIT1002_03791	0.42	-2.6
4,238,673	-		MIT1002_03791	0.42	-0.7
4,238,706	+		MIT1002_03791	0.44	-3.3
4,238,898	-		MIT1002_03791	0.58	-1.6
4,239,064	-		MIT1002_03791	0.71	-4.4
4,239,076	-		MIT1002_03791	0.72	-3.4
4,239,146	+		MIT1002_03791	0.77	-2.1
4,239,194	+		MIT1002_03791	0.80	-0.6
4,239,197	-		MIT1002_03791	0.81	-0.8
4,239,371	+				-3.1
4,239,372	+				-1.9
4,239,372	+				-2.3
4,239,374	-				-3.3
4,239,441	+				-4.1
4,239,441	+				-3.1
4,239,449	-				-2.8
4,239,454	-				-1.8
4,239,485	-				-0.7
4,239,487	+				-0.3
4,239,487	+				-0.2
4,239,495	-				+0.7
4,239,497	+				-1.7
4,239,500	-				+0.1
4,239,500	-				+0.2
4,240,067	-				-0.8
4,240,067	-				+0.6
4,240,143	+				-0.1
4,240,159	-				-1.4
4,240,193	-				-1.1
4,240,198	+				+0.0
4,240,206	-				+1.7
4,240,206	-				-0.8
4,240,206	-				-0.9
4,240,223	+				-1.5
4,240,310	-		MIT1002_03793	0.14	-0.9
4,240,399	+		MIT1002_03793	0.20	+0.1
4,240,399	+		MIT1002_03793	0.20	-0.1
4,240,407	-		MIT1002_03793	0.21	+0.4
4,240,421	+		MIT1002_03793	0.22	+0.4