Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03751

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,192,558	-		MIT1002_03750	0.88	+0.1
4,192,733	-				-1.1
4,192,766	-				-1.7
4,192,812	-				+0.0
4,192,812	-				-0.6
4,192,860	+		MIT1002_03751	0.15	+0.1
4,193,049	+		MIT1002_03751	0.50	+0.2
4,193,057	-		MIT1002_03751	0.51	+0.9
4,193,064	-		MIT1002_03751	0.52	-0.2
4,193,064	-		MIT1002_03751	0.52	+0.1
4,193,101	+		MIT1002_03751	0.59	+0.3
4,193,126	+		MIT1002_03751	0.64	+0.0
4,193,126	+		MIT1002_03751	0.64	+1.2
4,193,126	+		MIT1002_03751	0.64	-0.8
4,193,134	-		MIT1002_03751	0.65	-0.8
4,193,134	-		MIT1002_03751	0.65	+0.7
4,193,138	+		MIT1002_03751	0.66	+0.8
4,193,174	-		MIT1002_03751	0.73	+2.7
4,193,216	+		MIT1002_03751	0.80	+0.8
4,193,216	+		MIT1002_03751	0.80	+0.6
4,193,216	+		MIT1002_03751	0.80	+1.8
4,193,216	+		MIT1002_03751	0.80	+0.7
4,193,216	+		MIT1002_03751	0.80	+0.2
4,193,247	-		MIT1002_03751	0.86	-0.0
4,193,252	+		MIT1002_03751	0.87	-0.1
4,193,312	+				+1.0
4,193,371	-				+0.7
4,193,419	+				-0.3
4,193,425	+				-2.7
4,193,426	-				-1.3
4,193,427	-				-0.3
4,193,465	+				+1.4
4,193,473	-				-1.2
4,193,520	+				+0.1
4,193,536	+				-0.6
4,193,698	-		MIT1002_03752	0.13	-1.5
4,193,700	+		MIT1002_03752	0.13	-0.7
4,193,847	-		MIT1002_03752	0.28	+0.7
4,193,900	+		MIT1002_03752	0.34	-0.1
4,193,915	+		MIT1002_03752	0.36	+0.5
4,193,926	+		MIT1002_03752	0.37	+0.5
4,193,926	+		MIT1002_03752	0.37	-1.4
4,193,934	-		MIT1002_03752	0.38	-1.0
4,194,015	-		MIT1002_03752	0.46	+0.5
4,194,079	+		MIT1002_03752	0.53	-0.4
4,194,138	-		MIT1002_03752	0.59	-0.2
4,194,142	+		MIT1002_03752	0.59	+0.2
4,194,142	+		MIT1002_03752	0.59	+0.4
4,194,142	+		MIT1002_03752	0.59	+0.4
4,194,150	-		MIT1002_03752	0.60	-0.1
4,194,197	-		MIT1002_03752	0.65	-2.1
4,194,237	+		MIT1002_03752	0.69	-1.6
4,194,253	+		MIT1002_03752	0.71	-0.6
4,194,253	+		MIT1002_03752	0.71	+1.4
4,194,258	+		MIT1002_03752	0.72	-0.2
4,194,269	+		MIT1002_03752	0.73	-0.4