Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03611

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
4,035,254	+		MIT1002_03610	0.76	-1.3
4,035,266	+		MIT1002_03610	0.77	-0.3
4,035,268	-		MIT1002_03610	0.77	+2.7
4,035,275	-		MIT1002_03610	0.77	-1.1
4,035,300	+		MIT1002_03610	0.78	-0.3
4,035,306	+		MIT1002_03610	0.79	+1.4
4,035,331	-		MIT1002_03610	0.80	-1.8
4,035,362	-		MIT1002_03610	0.81	+0.0
4,035,434	-		MIT1002_03610	0.84	-0.6
4,035,501	+		MIT1002_03610	0.87	+0.6
4,035,518	+		MIT1002_03610	0.88	+0.4
4,035,656	-				-0.6
4,035,678	+				+0.7
4,035,678	+				+0.7
4,035,686	-				+1.5
4,035,686	-				-0.7
4,035,686	-				-0.8
4,035,780	+				+0.2
4,035,961	+				+1.1
4,035,985	+				-0.3
4,036,005	+				-1.6
4,036,023	-				-0.9
4,036,023	-				+0.5
4,036,023	-				-0.2
4,036,038	+				+0.7
4,036,067	-				-0.3
4,036,176	-		MIT1002_03611	0.17	+1.2
4,036,187	+		MIT1002_03611	0.21	-0.1
4,036,187	+		MIT1002_03611	0.21	-1.3
4,036,187	+		MIT1002_03611	0.21	+0.8
4,036,195	-		MIT1002_03611	0.23	+1.1
4,036,195	-		MIT1002_03611	0.23	-2.1
4,036,199	+		MIT1002_03611	0.25	+0.3
4,036,200	-		MIT1002_03611	0.25	-0.0
4,036,204	+		MIT1002_03611	0.27	+1.1
4,036,204	+		MIT1002_03611	0.27	-0.5
4,036,204	+		MIT1002_03611	0.27	+0.1
4,036,209	+		MIT1002_03611	0.28	-0.1
4,036,209	+		MIT1002_03611	0.28	-0.3
4,036,209	+		MIT1002_03611	0.28	+0.2
4,036,209	+		MIT1002_03611	0.28	-0.3
4,036,209	+		MIT1002_03611	0.28	+1.0
4,036,209	+		MIT1002_03611	0.28	+1.0
4,036,209	+		MIT1002_03611	0.28	+0.3
4,036,209	+		MIT1002_03611	0.28	-0.2
4,036,209	+		MIT1002_03611	0.28	+1.2
4,036,209	+		MIT1002_03611	0.28	-0.9
4,036,209	+		MIT1002_03611	0.28	+0.0
4,036,209	+		MIT1002_03611	0.28	-0.8
4,036,217	-		MIT1002_03611	0.31	+0.0
4,036,217	-		MIT1002_03611	0.31	-1.8
4,036,217	-		MIT1002_03611	0.31	+0.5
4,036,217	-		MIT1002_03611	0.31	-0.6
4,036,217	-		MIT1002_03611	0.31	+0.8
4,036,217	-		MIT1002_03611	0.31	+0.8
4,036,217	-		MIT1002_03611	0.31	+0.2
4,036,217	-		MIT1002_03611	0.31	+0.2
4,036,217	-		MIT1002_03611	0.31	+0.6
4,036,217	-		MIT1002_03611	0.31	-0.6
4,036,306	+		MIT1002_03611	0.63	+0.1
4,036,306	+		MIT1002_03611	0.63	-0.5
4,036,314	-		MIT1002_03611	0.66	+0.6
4,036,367	-		MIT1002_03611	0.84	-0.3
4,036,480	-				-0.0
4,036,496	-				+0.8
4,036,496	-				+0.4
4,036,529	-				-0.7
4,036,548	-				+1.1
4,036,553	+				+0.1
4,036,553	+				+0.8
4,036,561	-				+0.3
4,036,702	-		MIT1002_03612	0.34	+0.2
4,036,731	+		MIT1002_03612	0.39	+1.4
4,036,739	-		MIT1002_03612	0.40	-1.2
4,036,743	-		MIT1002_03612	0.41	-2.5
4,036,843	+		MIT1002_03612	0.59	+0.7
4,036,843	+		MIT1002_03612	0.59	-0.8
4,036,851	-		MIT1002_03612	0.60	-0.4
4,036,851	-		MIT1002_03612	0.60	+0.7
4,036,879	+		MIT1002_03612	0.65	+1.3
4,036,887	-		MIT1002_03612	0.66	-1.0
4,036,887	-		MIT1002_03612	0.66	-0.7
4,036,944	+		MIT1002_03612	0.77	-0.1
4,036,954	+		MIT1002_03612	0.78	+0.6
4,036,954	+		MIT1002_03612	0.78	+0.3
4,036,978	+		MIT1002_03612	0.83	-1.4
4,036,981	-		MIT1002_03612	0.83	-0.0
4,037,052	-				+0.2
4,037,070	+				+1.3
4,037,070	+				-0.3
4,037,078	-				+1.1
4,037,078	-				+1.5
4,037,114	-				+0.6
4,037,130	+				+0.7
4,037,146	-				-0.4
4,037,182	-				-0.4
4,037,182	-				-0.9
4,037,209	+				+0.1
4,037,247	+				-0.2
4,037,247	+				-0.3
4,037,255	-				-0.3
4,037,255	-				+0.4
4,037,335	-		MIT1002_03613	0.19	+0.4
4,037,369	+		MIT1002_03613	0.24	+1.1
4,037,369	+		MIT1002_03613	0.24	+0.3
4,037,387	+		MIT1002_03613	0.27	+0.1