Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03423

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,825,450	-		MIT1002_03422	0.37	-0.0
3,825,458	-		MIT1002_03422	0.37	+0.5
3,825,493	+		MIT1002_03422	0.40	+1.6
3,825,549	-		MIT1002_03422	0.44	-0.8
3,825,644	+		MIT1002_03422	0.51	+0.6
3,825,649	+		MIT1002_03422	0.52	+1.0
3,825,652	-		MIT1002_03422	0.52	+0.6
3,825,668	-		MIT1002_03422	0.53	-0.2
3,825,712	-		MIT1002_03422	0.56	+0.4
3,825,719	-		MIT1002_03422	0.57	+1.2
3,825,743	+		MIT1002_03422	0.59	-0.9
3,825,751	-		MIT1002_03422	0.59	+0.2
3,825,753	-		MIT1002_03422	0.59	-0.6
3,825,753	-		MIT1002_03422	0.59	-0.6
3,825,753	-		MIT1002_03422	0.59	-0.8
3,825,775	-		MIT1002_03422	0.61	+0.1
3,825,790	+		MIT1002_03422	0.62	+1.1
3,825,800	+		MIT1002_03422	0.63	-0.2
3,825,800	+		MIT1002_03422	0.63	-1.3
3,825,800	+		MIT1002_03422	0.63	+0.4
3,825,800	+		MIT1002_03422	0.63	-0.1
3,825,800	+		MIT1002_03422	0.63	-0.0
3,825,808	-		MIT1002_03422	0.63	-1.5
3,825,808	-		MIT1002_03422	0.63	-1.8
3,825,808	-		MIT1002_03422	0.63	+1.4
3,825,808	-		MIT1002_03422	0.63	+0.2
3,825,808	-		MIT1002_03422	0.63	-1.0
3,825,808	-		MIT1002_03422	0.63	-1.6
3,825,808	-		MIT1002_03422	0.63	-0.9
3,825,808	-		MIT1002_03422	0.63	-1.1
3,825,808	-		MIT1002_03422	0.63	+0.2
3,825,919	-		MIT1002_03422	0.72	+0.3
3,825,928	+		MIT1002_03422	0.72	+0.1
3,825,946	-		MIT1002_03422	0.74	-0.9
3,825,946	-		MIT1002_03422	0.74	-0.9
3,826,043	+		MIT1002_03422	0.81	+0.6
3,826,140	+		MIT1002_03422	0.88	-0.3
3,826,148	-		MIT1002_03422	0.89	+1.4
3,826,264	-				+1.0
3,826,378	-				-0.7
3,826,395	-		MIT1002_03423	0.12	-0.2
3,826,517	-		MIT1002_03423	0.76	-1.5
3,826,545	+				-2.4
3,826,632	+				-1.3
3,826,708	+				+1.7
3,826,802	-				-0.1
3,826,849	+				+0.5
3,826,857	-				-0.8
3,826,949	+				-1.8
3,826,968	+				+0.6
3,827,034	-		MIT1002_03424	0.15	-1.4
3,827,149	-		MIT1002_03424	0.29	-0.3
3,827,159	-		MIT1002_03424	0.30	+0.1
3,827,196	-		MIT1002_03424	0.34	+0.6
3,827,196	-		MIT1002_03424	0.34	+0.2
3,827,251	-		MIT1002_03424	0.41	-1.0
3,827,315	-		MIT1002_03424	0.49	-0.8
3,827,402	-		MIT1002_03424	0.59	+1.3