Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03330

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,719,525	-				-0.4
3,719,531	-				-1.5
3,719,539	-				-0.1
3,719,540	+				-2.3
3,719,607	+		MIT1002_03329	0.11	-1.9
3,719,612	+		MIT1002_03329	0.12	+2.2
3,719,647	+		MIT1002_03329	0.16	-0.9
3,719,647	+		MIT1002_03329	0.16	-1.0
3,719,655	-		MIT1002_03329	0.17	+0.6
3,719,707	-		MIT1002_03329	0.23	-3.2
3,719,718	+		MIT1002_03329	0.24	-1.3
3,719,731	+		MIT1002_03329	0.25	-0.0
3,719,742	-		MIT1002_03329	0.26	-1.3
3,719,744	-		MIT1002_03329	0.27	-1.9
3,719,780	+		MIT1002_03329	0.31	-0.7
3,719,788	-		MIT1002_03329	0.32	-1.0
3,719,814	-		MIT1002_03329	0.34	-0.2
3,719,814	-		MIT1002_03329	0.34	-1.5
3,719,815	-		MIT1002_03329	0.35	-0.2
3,719,860	-		MIT1002_03329	0.40	-0.7
3,719,860	-		MIT1002_03329	0.40	+0.2
3,719,907	+		MIT1002_03329	0.45	-1.7
3,719,958	-		MIT1002_03329	0.50	-2.2
3,719,958	-		MIT1002_03329	0.50	-0.5
3,720,041	+		MIT1002_03329	0.60	-2.6
3,720,042	-		MIT1002_03329	0.60	-2.4
3,720,059	-		MIT1002_03329	0.62	-0.6
3,720,458	+				-0.1
3,720,459	-				-0.5
3,720,459	-				-1.9
3,720,475	-				-0.3
3,720,536	-				-3.5
3,720,603	-				-2.3
3,720,719	+		MIT1002_03330	0.19	-1.7
3,720,818	-		MIT1002_03330	0.27	-2.2
3,720,836	-		MIT1002_03330	0.29	-2.9
3,720,888	-		MIT1002_03330	0.34	-1.9
3,720,935	+		MIT1002_03330	0.38	-1.7
3,720,943	-		MIT1002_03330	0.38	-1.6
3,720,943	-		MIT1002_03330	0.38	-1.5
3,720,949	+		MIT1002_03330	0.39	-2.1
3,720,965	-		MIT1002_03330	0.40	-2.1
3,721,017	+		MIT1002_03330	0.45	-4.1
3,721,025	-		MIT1002_03330	0.46	-1.8
3,721,213	+		MIT1002_03330	0.62	+1.2
3,721,220	-		MIT1002_03330	0.63	-2.8
3,721,222	+		MIT1002_03330	0.63	-2.3
3,721,243	+		MIT1002_03330	0.65	-2.2
3,721,320	-		MIT1002_03330	0.72	-1.7
3,721,353	+		MIT1002_03330	0.75	-3.4
3,721,366	-		MIT1002_03330	0.76	-2.8
3,721,448	-		MIT1002_03330	0.83	-1.7
3,721,518	+		MIT1002_03330	0.89	-3.8
3,721,546	+				-0.9
3,721,549	-				-1.0
3,721,592	-				-1.9
3,721,592	-				-0.7
3,721,776	+				-0.5
3,721,785	+				-1.3
3,721,853	-				-2.5
3,721,856	+				-3.9
3,721,856	+				-2.0
3,721,864	-				-2.5
3,721,864	-				-2.6
3,721,898	+				-1.9
3,721,945	+		MIT1002_03331	0.10	-1.2
3,721,953	-		MIT1002_03331	0.11	-0.5
3,722,058	-		MIT1002_03331	0.17	-4.4
3,722,097	-		MIT1002_03331	0.19	-4.3
3,722,171	+		MIT1002_03331	0.24	-0.7
3,722,402	-		MIT1002_03331	0.37	-3.9
3,722,412	-		MIT1002_03331	0.37	-3.4
3,722,584	-		MIT1002_03331	0.47	-2.3
3,722,621	+		MIT1002_03331	0.49	-3.5
3,722,633	+		MIT1002_03331	0.50	-2.0