Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03222

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,592,159	-		MIT1002_03221	0.19	-0.2
3,592,218	+		MIT1002_03221	0.26	+0.3
3,592,248	-		MIT1002_03221	0.29	-0.1
3,592,262	-		MIT1002_03221	0.30	+0.6
3,592,274	+		MIT1002_03221	0.32	-1.6
3,592,295	+		MIT1002_03221	0.34	+1.2
3,592,295	+		MIT1002_03221	0.34	-1.3
3,592,308	-		MIT1002_03221	0.36	+1.7
3,592,313	+		MIT1002_03221	0.36	-0.3
3,592,330	-		MIT1002_03221	0.38	+0.3
3,592,364	+		MIT1002_03221	0.42	+0.5
3,592,387	-		MIT1002_03221	0.44	+0.2
3,592,396	+		MIT1002_03221	0.45	-1.3
3,592,404	-		MIT1002_03221	0.46	-0.4
3,592,406	+		MIT1002_03221	0.46	+0.7
3,592,414	-		MIT1002_03221	0.47	+0.9
3,592,457	-		MIT1002_03221	0.52	-0.5
3,592,457	-		MIT1002_03221	0.52	+0.8
3,592,459	+		MIT1002_03221	0.52	+0.5
3,592,564	-		MIT1002_03221	0.64	-1.6
3,592,603	-		MIT1002_03221	0.68	+0.4
3,592,685	-		MIT1002_03221	0.78	+0.0
3,592,803	+				-0.1
3,592,803	+				+0.2
3,592,803	+				-0.1
3,592,811	-				-1.0
3,592,811	-				-2.6
3,592,811	-				+1.1
3,592,811	-				-0.5
3,592,811	-				-0.1
3,592,857	-				-0.5
3,592,861	+				-0.2
3,592,863	+				+2.2
3,592,863	+				+0.4
3,592,863	+				-0.0
3,592,869	-				-0.6
3,592,869	-				-0.5
3,592,871	-				+1.5
3,592,871	-				+1.3
3,593,024	+				-0.6
3,593,037	+				+1.7
3,593,061	+				-0.2
3,593,075	+				-0.6
3,593,083	-				-1.1
3,593,083	-				+1.5
3,593,204	+		MIT1002_03222	0.16	-0.1
3,593,212	+		MIT1002_03222	0.16	-0.8
3,593,239	-		MIT1002_03222	0.19	-0.8
3,593,301	+		MIT1002_03222	0.25	-2.2
3,593,309	-		MIT1002_03222	0.26	-0.4
3,593,317	+		MIT1002_03222	0.27	+0.9
3,593,325	-		MIT1002_03222	0.27	-1.6
3,593,359	+		MIT1002_03222	0.31	+0.5
3,593,385	-		MIT1002_03222	0.33	+0.2
3,593,398	-		MIT1002_03222	0.35	+0.4
3,593,398	-		MIT1002_03222	0.35	-0.6
3,593,476	-		MIT1002_03222	0.42	-0.5
3,593,511	+		MIT1002_03222	0.46	+0.1
3,593,521	-		MIT1002_03222	0.47	-0.1
3,593,617	-		MIT1002_03222	0.56	-2.1
3,593,623	-		MIT1002_03222	0.57	+0.9
3,593,664	+		MIT1002_03222	0.61	-1.2
3,593,672	-		MIT1002_03222	0.62	+0.0
3,593,680	-		MIT1002_03222	0.62	-1.5
3,593,680	-		MIT1002_03222	0.62	+0.9
3,593,794	+		MIT1002_03222	0.74	-0.7
3,593,860	+		MIT1002_03222	0.80	+0.3
3,593,876	+		MIT1002_03222	0.82	-1.3
3,593,876	+		MIT1002_03222	0.82	+1.5
3,593,876	+		MIT1002_03222	0.82	-0.6
3,593,884	-		MIT1002_03222	0.82	-0.2
3,593,896	+		MIT1002_03222	0.84	-0.6
3,593,904	-		MIT1002_03222	0.84	-0.4
3,593,924	-		MIT1002_03222	0.86	+2.2
3,593,969	-				+0.2
3,594,020	-				-1.9
3,594,130	+		MIT1002_03223	0.19	-1.0
3,594,342	+		MIT1002_03223	0.82	+1.2
3,594,350	-		MIT1002_03223	0.84	-1.1
3,594,350	-		MIT1002_03223	0.84	-2.3
3,594,350	-		MIT1002_03223	0.84	-0.4