Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03136

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,492,151	+		MIT1002_03135	0.43	-0.3
3,492,169	+		MIT1002_03135	0.44	-1.1
3,492,177	-		MIT1002_03135	0.44	-1.6
3,492,177	-		MIT1002_03135	0.44	-1.7
3,492,280	-		MIT1002_03135	0.50	-0.4
3,492,281	-		MIT1002_03135	0.50	+0.0
3,492,281	-		MIT1002_03135	0.50	+0.6
3,492,317	+		MIT1002_03135	0.52	+0.4
3,492,347	+		MIT1002_03135	0.54	+0.2
3,492,400	-		MIT1002_03135	0.57	-1.6
3,492,408	+		MIT1002_03135	0.58	-0.7
3,492,458	+		MIT1002_03135	0.61	+0.6
3,492,466	-		MIT1002_03135	0.61	-1.2
3,492,481	-		MIT1002_03135	0.62	+0.8
3,492,483	-		MIT1002_03135	0.62	-1.3
3,492,516	+		MIT1002_03135	0.64	+0.7
3,492,633	+		MIT1002_03135	0.71	-2.8
3,492,639	-		MIT1002_03135	0.71	-2.5
3,492,641	+		MIT1002_03135	0.71	+0.5
3,492,649	-		MIT1002_03135	0.72	-0.5
3,492,716	+		MIT1002_03135	0.76	-0.1
3,492,724	-		MIT1002_03135	0.76	-1.1
3,492,803	-		MIT1002_03135	0.81	+0.4
3,492,816	+		MIT1002_03135	0.82	-0.2
3,492,820	-		MIT1002_03135	0.82	-1.4
3,492,851	-		MIT1002_03135	0.84	+0.9
3,492,851	-		MIT1002_03135	0.84	-0.4
3,492,885	-		MIT1002_03135	0.86	+1.2
3,492,897	+		MIT1002_03135	0.86	+0.7
3,492,905	-		MIT1002_03135	0.87	+0.8
3,492,918	+		MIT1002_03135	0.88	+0.4
3,493,188	+		MIT1002_03136	0.11	+0.0
3,493,238	+		MIT1002_03136	0.20	-0.8
3,493,246	-		MIT1002_03136	0.21	+0.2
3,493,271	-		MIT1002_03136	0.26	-0.3
3,493,276	-		MIT1002_03136	0.27	+0.6
3,493,276	-		MIT1002_03136	0.27	-0.7
3,493,409	+		MIT1002_03136	0.51	-0.0
3,493,417	+		MIT1002_03136	0.52	-0.6
3,493,417	-		MIT1002_03136	0.52	+1.8
3,493,531	+		MIT1002_03136	0.73	-1.4
3,493,546	+		MIT1002_03136	0.75	+0.3
3,493,612	-		MIT1002_03136	0.87	-2.3
3,493,637	-				+1.0
3,493,637	-				-1.6
3,493,692	+				+2.1
3,493,700	-				+0.1
3,493,717	-				-0.2
3,493,740	+				+1.3
3,493,855	-				-0.8
3,493,872	-				+0.6
3,493,901	+				-1.3
3,493,945	+				+0.5
3,493,955	+				+0.2
3,494,012	+				-1.1
3,494,015	-				-0.1
3,494,024	+				-2.2
3,494,032	-				+1.1
3,494,057	-				-0.2
3,494,105	-				-1.6
3,494,198	-		MIT1002_03137	0.14	-1.2
3,494,241	+		MIT1002_03137	0.16	-2.3
3,494,242	+		MIT1002_03137	0.16	-1.7
3,494,249	+		MIT1002_03137	0.16	-1.6
3,494,249	-		MIT1002_03137	0.16	+0.4
3,494,250	-		MIT1002_03137	0.16	-0.1
3,494,297	-		MIT1002_03137	0.18	-0.5
3,494,395	+		MIT1002_03137	0.22	-2.4
3,494,485	+		MIT1002_03137	0.26	-1.6
3,494,508	-		MIT1002_03137	0.27	-1.9
3,494,549	+		MIT1002_03137	0.29	-0.5
3,494,639	+		MIT1002_03137	0.33	-0.4
3,494,647	-		MIT1002_03137	0.33	-0.1