Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03123

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,475,777	+		MIT1002_03122	0.16	+1.2
3,475,784	-		MIT1002_03122	0.17	-1.0
3,475,822	+		MIT1002_03122	0.20	+0.8
3,475,827	+		MIT1002_03122	0.20	-0.6
3,475,837	+		MIT1002_03122	0.21	-0.9
3,475,846	-		MIT1002_03122	0.22	+0.9
3,475,861	-		MIT1002_03122	0.23	-2.7
3,475,977	-		MIT1002_03122	0.33	+0.7
3,476,069	+		MIT1002_03122	0.41	-1.7
3,476,069	+		MIT1002_03122	0.41	+0.2
3,476,090	+		MIT1002_03122	0.42	+0.2
3,476,090	+		MIT1002_03122	0.42	-0.4
3,476,098	-		MIT1002_03122	0.43	+0.7
3,476,147	-		MIT1002_03122	0.47	+0.4
3,476,233	-		MIT1002_03122	0.54	+0.6
3,476,339	-		MIT1002_03122	0.63	+0.4
3,476,339	-		MIT1002_03122	0.63	-1.0
3,476,405	-		MIT1002_03122	0.69	+0.3
3,476,431	-		MIT1002_03122	0.71	-1.5
3,476,464	+		MIT1002_03122	0.74	-2.2
3,476,497	-		MIT1002_03122	0.77	-0.9
3,476,519	-		MIT1002_03122	0.78	-0.6
3,476,614	+		MIT1002_03122	0.86	-0.5
3,476,614	+		MIT1002_03122	0.86	-1.4
3,476,614	+		MIT1002_03122	0.86	-1.1
3,476,614	+		MIT1002_03122	0.86	-0.4
3,476,614	+		MIT1002_03122	0.86	-1.2
3,476,622	-		MIT1002_03122	0.87	-0.5
3,476,622	-		MIT1002_03122	0.87	+1.9
3,476,622	-		MIT1002_03122	0.87	-2.4
3,476,622	-		MIT1002_03122	0.87	-0.5
3,476,680	+				+1.2
3,476,682	-				+1.8
3,476,741	-				-0.6
3,476,852	-		MIT1002_03123	0.13	+0.8
3,476,909	-		MIT1002_03123	0.22	+0.1
3,476,923	+		MIT1002_03123	0.24	+0.0
3,476,923	+		MIT1002_03123	0.24	+0.2
3,476,926	-		MIT1002_03123	0.25	+0.7
3,476,978	+		MIT1002_03123	0.33	-1.0
3,477,073	+		MIT1002_03123	0.48	+0.4
3,477,081	-		MIT1002_03123	0.50	+2.3
3,477,130	-		MIT1002_03123	0.58	-0.5
3,477,266	-		MIT1002_03123	0.80	+0.2
3,477,349	+				+0.7
3,477,437	+		MIT1002_03124	0.11	-1.9
3,477,471	+		MIT1002_03124	0.21	+0.6
3,477,488	+		MIT1002_03124	0.26	+0.4
3,477,517	+		MIT1002_03124	0.35	+0.5
3,477,517	+		MIT1002_03124	0.35	-0.3
3,477,525	-		MIT1002_03124	0.38	+0.9
3,477,533	+		MIT1002_03124	0.40	-2.0
3,477,533	+		MIT1002_03124	0.40	+0.3
3,477,560	-		MIT1002_03124	0.48	+0.1
3,477,734	-				-0.1
3,477,736	-				-1.1
3,477,757	+				-0.4
3,477,765	-				-0.8
3,477,800	+				-1.4
3,477,839	+		MIT1002_03125	0.20	-0.6
3,477,847	-		MIT1002_03125	0.23	-0.2
3,477,847	-		MIT1002_03125	0.23	+0.8
3,477,847	-		MIT1002_03125	0.23	+0.6
3,477,930	+		MIT1002_03125	0.53	+0.2
3,477,963	-		MIT1002_03125	0.66	+0.4
3,477,974	+		MIT1002_03125	0.70	+0.5
3,477,974	+		MIT1002_03125	0.70	-0.2
3,477,990	+		MIT1002_03125	0.75	-2.6
3,477,994	-		MIT1002_03125	0.77	+0.5
3,477,995	-		MIT1002_03125	0.77	+1.5
3,477,999	-		MIT1002_03125	0.79	-1.2
3,477,999	-		MIT1002_03125	0.79	+0.2
3,478,026	+		MIT1002_03125	0.89	-0.1
3,478,093	-				+0.2
3,478,242	+				+0.9
3,478,244	+				+0.5
3,478,321	-				-0.9