Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03115

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,469,105	+		MIT1002_03114	0.50	+0.2
3,469,302	-		MIT1002_03114	0.60	-1.5
3,469,540	+		MIT1002_03114	0.72	+0.2
3,469,696	-		MIT1002_03114	0.80	+0.2
3,469,710	+		MIT1002_03114	0.81	+0.2
3,469,711	+		MIT1002_03114	0.81	-0.1
3,469,751	-		MIT1002_03114	0.83	-0.5
3,469,792	+		MIT1002_03114	0.85	+1.9
3,469,995	+				-0.1
3,469,995	+				-0.1
3,470,110	+				+0.0
3,470,110	+				+0.8
3,470,110	+				+0.6
3,470,118	-				-0.6
3,470,118	-				-1.4
3,470,118	-				+0.5
3,470,120	+				-0.5
3,470,133	-				-1.2
3,470,162	+		MIT1002_03115	0.18	-0.4
3,470,163	-		MIT1002_03115	0.18	+1.4
3,470,197	-		MIT1002_03115	0.28	-0.5
3,470,213	+		MIT1002_03115	0.33	-0.3
3,470,231	+		MIT1002_03115	0.38	-0.3
3,470,284	+		MIT1002_03115	0.54	-1.3
3,470,292	-		MIT1002_03115	0.56	-0.3
3,470,292	-		MIT1002_03115	0.56	-0.8
3,470,292	-		MIT1002_03115	0.56	-0.9
3,470,333	-		MIT1002_03115	0.68	-0.2
3,470,333	-		MIT1002_03115	0.68	+1.8
3,470,448	+				-1.4
3,470,475	+				-0.3
3,470,494	-				+1.8
3,470,494	-				-0.5
3,470,582	-				-0.3
3,470,618	+				+0.4
3,470,681	-				+1.6
3,470,724	+				+0.9
3,470,757	-		MIT1002_03116	0.12	+0.7
3,470,800	-		MIT1002_03116	0.16	+1.2
3,470,811	+		MIT1002_03116	0.17	+0.6
3,470,862	-		MIT1002_03116	0.22	+1.3
3,470,897	-		MIT1002_03116	0.25	+0.6
3,470,941	+		MIT1002_03116	0.29	+2.4
3,470,959	-		MIT1002_03116	0.31	+0.3
3,471,004	-		MIT1002_03116	0.35	+0.9
3,471,183	+		MIT1002_03116	0.51	+2.5
3,471,183	+		MIT1002_03116	0.51	+1.6
3,471,193	+		MIT1002_03116	0.52	+1.7
3,471,266	-		MIT1002_03116	0.59	+1.0
3,471,345	+		MIT1002_03116	0.66	+1.5
3,471,353	-		MIT1002_03116	0.67	-0.8
3,471,427	-		MIT1002_03116	0.74	+1.0
3,471,438	+		MIT1002_03116	0.75	+0.4
3,471,438	+		MIT1002_03116	0.75	+1.7
3,471,438	+		MIT1002_03116	0.75	+2.7
3,471,439	-		MIT1002_03116	0.75	-0.2