Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02843

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,151,486	+				+0.0
3,151,575	+				-0.6
3,151,575	+				+1.2
3,151,583	-				-0.7
3,151,583	-				+0.6
3,151,633	+		MIT1002_02842	0.12	-1.2
3,151,748	+		MIT1002_02842	0.26	-1.1
3,151,818	+		MIT1002_02842	0.34	-1.3
3,151,823	+		MIT1002_02842	0.35	-0.5
3,151,826	-		MIT1002_02842	0.35	+0.2
3,151,831	+		MIT1002_02842	0.36	+0.5
3,151,831	+		MIT1002_02842	0.36	-0.5
3,151,838	+		MIT1002_02842	0.36	-1.7
3,151,838	+		MIT1002_02842	0.36	-0.1
3,151,838	+		MIT1002_02842	0.36	-2.0
3,151,839	-		MIT1002_02842	0.37	-1.3
3,151,857	+		MIT1002_02842	0.39	-0.5
3,151,865	-		MIT1002_02842	0.40	-0.3
3,151,865	-		MIT1002_02842	0.40	-1.1
3,151,865	-		MIT1002_02842	0.40	-0.1
3,151,872	+		MIT1002_02842	0.41	-1.2
3,151,872	+		MIT1002_02842	0.41	-0.5
3,151,872	+		MIT1002_02842	0.41	+1.1
3,151,872	+		MIT1002_02842	0.41	-0.4
3,151,880	-		MIT1002_02842	0.42	+1.9
3,151,880	-		MIT1002_02842	0.42	-0.9
3,151,880	-		MIT1002_02842	0.42	-0.1
3,151,880	-		MIT1002_02842	0.42	+0.1
3,151,880	-		MIT1002_02842	0.42	-0.5
3,151,880	-		MIT1002_02842	0.42	+2.0
3,151,880	-		MIT1002_02842	0.42	-0.5
3,151,880	-		MIT1002_02842	0.42	+0.3
3,151,922	-		MIT1002_02842	0.47	-0.2
3,151,961	-		MIT1002_02842	0.51	-0.7
3,151,996	+		MIT1002_02842	0.55	-2.2
3,152,065	+		MIT1002_02842	0.64	+1.0
3,152,092	-		MIT1002_02842	0.67	+0.3
3,152,111	+		MIT1002_02842	0.69	+0.1
3,152,111	+		MIT1002_02842	0.69	-0.1
3,152,120	-		MIT1002_02842	0.70	+0.1
3,152,167	+		MIT1002_02842	0.76	-0.7
3,152,179	+		MIT1002_02842	0.77	-0.7
3,152,179	+		MIT1002_02842	0.77	-0.2
3,152,179	+		MIT1002_02842	0.77	-0.2
3,152,179	+		MIT1002_02842	0.77	+0.2
3,152,187	-		MIT1002_02842	0.78	+0.4
3,152,237	+		MIT1002_02842	0.84	-0.0
3,152,245	-		MIT1002_02842	0.85	-3.7
3,152,259	-		MIT1002_02842	0.87	+0.5
3,152,306	-				-0.4
3,152,358	+				-0.6
3,152,493	-				-1.7
3,152,493	-				-0.1
3,152,529	-		MIT1002_02843	0.13	-1.4
3,152,534	-		MIT1002_02843	0.14	-0.1
3,152,534	-		MIT1002_02843	0.14	-0.2
3,152,534	-		MIT1002_02843	0.14	-0.0
3,152,558	-		MIT1002_02843	0.17	-0.6
3,152,558	-		MIT1002_02843	0.17	+0.3
3,152,598	-		MIT1002_02843	0.22	-0.3
3,152,650	+		MIT1002_02843	0.28	-2.6
3,152,650	+		MIT1002_02843	0.28	-0.9
3,152,658	-		MIT1002_02843	0.29	-2.3
3,152,849	-		MIT1002_02843	0.53	+0.3
3,153,015	-		MIT1002_02843	0.74	+0.2
3,153,084	+		MIT1002_02843	0.83	-0.2
3,153,092	-		MIT1002_02843	0.84	-1.0
3,153,100	-		MIT1002_02843	0.85	+1.3
3,153,150	+				-0.6
3,153,363	-				-0.9
3,153,408	+				-0.0
3,153,418	+				+0.3
3,153,418	+				+0.1
3,153,418	+				+0.1
3,153,418	+				-0.3
3,153,418	+				-1.0
3,153,426	-				+0.6
3,153,426	-				-0.0
3,153,426	-				+0.1
3,153,476	-				-2.1
3,153,481	-				+0.2
3,153,528	+				-0.6
3,153,548	-				-3.2
3,153,589	-				-0.6
3,153,607	+				+2.1
3,153,659	-		MIT1002_02844	0.11	+1.4
3,153,698	-		MIT1002_02844	0.12	+0.3
3,153,853	-		MIT1002_02844	0.18	-0.1
3,153,853	-		MIT1002_02844	0.18	-0.8
3,153,857	+		MIT1002_02844	0.18	+0.1
3,153,944	+		MIT1002_02844	0.21	-1.1
3,153,945	+		MIT1002_02844	0.21	+0.8
3,154,000	+		MIT1002_02844	0.24	-0.3
3,154,019	+		MIT1002_02844	0.24	-1.1
3,154,119	+		MIT1002_02844	0.28	-1.2
3,154,131	-		MIT1002_02844	0.28	+0.8
3,154,138	+		MIT1002_02844	0.29	-0.0
3,154,138	+		MIT1002_02844	0.29	-2.6
3,154,138	+		MIT1002_02844	0.29	-1.9
3,154,138	+		MIT1002_02844	0.29	-0.6
3,154,146	-		MIT1002_02844	0.29	-2.0
3,154,213	+		MIT1002_02844	0.31	+0.3