Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02807

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
3,110,784	-				+0.9
3,110,798	-				+0.1
3,110,824	+		MIT1002_02806	0.10	+0.8
3,110,824	+		MIT1002_02806	0.10	+0.1
3,110,830	-		MIT1002_02806	0.11	-0.0
3,110,841	+		MIT1002_02806	0.12	+0.1
3,110,849	-		MIT1002_02806	0.13	-0.2
3,110,849	-		MIT1002_02806	0.13	+1.8
3,110,856	+		MIT1002_02806	0.14	-0.4
3,110,873	+		MIT1002_02806	0.16	+0.5
3,110,902	-		MIT1002_02806	0.20	-1.0
3,110,942	-		MIT1002_02806	0.25	-0.8
3,111,030	+		MIT1002_02806	0.37	-1.6
3,111,059	+		MIT1002_02806	0.41	-1.9
3,111,059	+		MIT1002_02806	0.41	-1.8
3,111,108	+		MIT1002_02806	0.47	+0.2
3,111,126	+		MIT1002_02806	0.50	+0.3
3,111,134	-		MIT1002_02806	0.51	-0.8
3,111,176	-		MIT1002_02806	0.56	-1.4
3,111,248	-		MIT1002_02806	0.65	+0.8
3,111,304	-		MIT1002_02806	0.73	+1.2
3,111,338	+		MIT1002_02806	0.77	+0.5
3,111,369	+		MIT1002_02806	0.81	-0.3
3,111,417	-		MIT1002_02806	0.88	-0.4
3,111,417	-		MIT1002_02806	0.88	-0.3
3,111,424	+		MIT1002_02806	0.88	+1.4
3,111,424	+		MIT1002_02806	0.88	-0.7
3,111,424	+		MIT1002_02806	0.88	-0.9
3,111,432	-		MIT1002_02806	0.90	+1.1
3,111,514	+				-0.1
3,111,522	-				-0.3
3,111,579	+				-1.2
3,111,579	+				-1.7
3,111,587	+				+0.5
3,111,587	-				-1.1
3,111,595	-				+1.1
3,111,604	+				-1.2
3,111,604	+				-1.4
3,111,604	+				+0.4
3,111,612	-				-0.8
3,111,612	-				-1.8
3,111,623	-				-0.8
3,112,043	+		MIT1002_02807	0.36	-2.3
3,112,091	+		MIT1002_02807	0.42	-1.0
3,112,100	+		MIT1002_02807	0.43	-0.2
3,112,153	+		MIT1002_02807	0.50	-1.9
3,112,168	+		MIT1002_02807	0.52	-1.3
3,112,176	-		MIT1002_02807	0.53	+0.1
3,112,199	-		MIT1002_02807	0.56	-1.0
3,112,272	+		MIT1002_02807	0.65	-0.1
3,112,339	-		MIT1002_02807	0.74	-0.8
3,112,339	-		MIT1002_02807	0.74	-1.6
3,112,514	+				-0.4
3,112,540	+				+0.4
3,112,615	+				-2.0
3,112,615	+				-1.2
3,112,623	+				-3.1
3,112,623	+				+1.1
3,112,623	-				+0.3
3,112,623	-				+6.6
3,112,623	-				-0.7
3,112,704	-				+0.0
3,112,767	-				+0.6
3,112,860	+		MIT1002_02808	0.14	+0.8
3,112,860	+		MIT1002_02808	0.14	+0.6
3,112,865	-		MIT1002_02808	0.15	-0.7
3,112,875	+		MIT1002_02808	0.16	-0.5
3,113,004	+		MIT1002_02808	0.26	+0.6
3,113,025	+		MIT1002_02808	0.27	-0.8
3,113,025	+		MIT1002_02808	0.27	+0.1
3,113,028	+		MIT1002_02808	0.28	-0.5
3,113,033	-		MIT1002_02808	0.28	-0.0
3,113,089	+		MIT1002_02808	0.32	-1.0
3,113,097	-		MIT1002_02808	0.33	-0.6
3,113,135	+		MIT1002_02808	0.36	+2.7
3,113,209	+		MIT1002_02808	0.42	-0.5
3,113,284	-		MIT1002_02808	0.48	-2.1
3,113,458	+		MIT1002_02808	0.61	-1.7
3,113,491	+		MIT1002_02808	0.64	-2.8
3,113,491	+		MIT1002_02808	0.64	-0.6
3,113,524	+		MIT1002_02808	0.66	-2.2
3,113,527	-		MIT1002_02808	0.67	-1.2
3,113,527	-		MIT1002_02808	0.67	+0.3
3,113,527	-		MIT1002_02808	0.67	+1.0