Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02503

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
2,791,339	+				+0.2
2,791,463	+				-0.5
2,792,233	+				-1.1
2,792,291	+				-0.9
2,792,301	+				+0.1
2,792,301	+				-1.4
2,792,309	-				-1.6
2,792,415	-		MIT1002_02503	0.18	-0.6
2,792,434	+		MIT1002_02503	0.21	-0.5
2,792,451	+		MIT1002_02503	0.23	-1.8
2,792,569	+		MIT1002_02503	0.43	-0.4
2,792,569	+		MIT1002_02503	0.43	-1.1
2,792,570	-		MIT1002_02503	0.43	-1.2
2,792,577	-		MIT1002_02503	0.44	-1.3
2,792,590	+		MIT1002_02503	0.46	-0.8
2,792,596	-		MIT1002_02503	0.47	-0.4
2,792,596	-		MIT1002_02503	0.47	+0.1
2,792,642	+		MIT1002_02503	0.54	+1.6
2,792,651	+		MIT1002_02503	0.56	-0.9
2,792,678	-		MIT1002_02503	0.60	-0.8
2,792,689	+		MIT1002_02503	0.62	+0.3
2,792,689	+		MIT1002_02503	0.62	-0.7
2,792,689	+		MIT1002_02503	0.62	+0.2
2,792,692	-		MIT1002_02503	0.63	-0.5
2,792,697	-		MIT1002_02503	0.63	+1.3
2,792,697	-		MIT1002_02503	0.63	+0.3
2,792,697	-		MIT1002_02503	0.63	+0.1
2,792,709	-		MIT1002_02503	0.65	-0.3
2,792,718	+		MIT1002_02503	0.67	-0.8
2,792,803	-		MIT1002_02503	0.81	-0.9
2,792,854	+		MIT1002_02503	0.89	-1.6
2,792,914	+				+1.0
2,793,026	-				-0.6
2,793,155	+		MIT1002_02504	0.12	+0.1
2,793,268	-		MIT1002_02504	0.19	-1.4
2,793,295	+		MIT1002_02504	0.20	+0.5
2,793,303	-		MIT1002_02504	0.21	-0.9
2,793,378	+		MIT1002_02504	0.25	-0.7
2,793,378	+		MIT1002_02504	0.25	-0.1
2,793,400	+		MIT1002_02504	0.26	-1.3
2,793,400	+		MIT1002_02504	0.26	-1.2
2,793,408	-		MIT1002_02504	0.26	-0.1
2,793,447	+		MIT1002_02504	0.29	+0.2
2,793,455	-		MIT1002_02504	0.29	+0.9
2,793,508	+		MIT1002_02504	0.32	-0.8
2,793,533	+		MIT1002_02504	0.34	+0.1
2,793,549	+		MIT1002_02504	0.34	+1.0
2,793,555	-		MIT1002_02504	0.35	-1.9
2,793,667	+		MIT1002_02504	0.41	-1.4
2,793,801	-		MIT1002_02504	0.49	+0.1
2,793,812	-		MIT1002_02504	0.49	+1.0
2,793,916	+		MIT1002_02504	0.55	-1.4