Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02406

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
2,686,733	-		MIT1002_02405	0.46	-0.7
2,686,733	-		MIT1002_02405	0.46	-2.2
2,686,733	-		MIT1002_02405	0.46	-2.8
2,686,733	-		MIT1002_02405	0.46	-0.5
2,686,771	-		MIT1002_02405	0.49	-1.2
2,686,834	+		MIT1002_02405	0.52	-0.5
2,686,842	-		MIT1002_02405	0.52	+0.5
2,686,908	-		MIT1002_02405	0.56	-0.9
2,686,925	-		MIT1002_02405	0.57	+0.3
2,686,999	-		MIT1002_02405	0.61	+0.5
2,687,114	-		MIT1002_02405	0.67	+0.3
2,687,167	+		MIT1002_02405	0.70	-0.3
2,687,205	+		MIT1002_02405	0.72	-0.3
2,687,215	-		MIT1002_02405	0.73	-1.4
2,687,314	-		MIT1002_02405	0.78	-0.3
2,687,336	+		MIT1002_02405	0.79	-0.5
2,687,362	+		MIT1002_02405	0.81	-0.3
2,687,370	-		MIT1002_02405	0.81	+0.3
2,687,370	-		MIT1002_02405	0.81	-0.7
2,687,404	+		MIT1002_02405	0.83	-1.3
2,687,407	-		MIT1002_02405	0.83	-1.1
2,687,412	-		MIT1002_02405	0.84	-1.7
2,687,422	-		MIT1002_02405	0.84	+0.3
2,687,456	-		MIT1002_02405	0.86	-1.9
2,687,568	-				+0.3
2,687,568	-				-0.3
2,687,585	-				-1.2
2,687,625	-				-1.5
2,687,732	+				-1.3
2,687,740	-				-2.3
2,687,907	+		MIT1002_02406	0.27	-0.7
2,687,942	+		MIT1002_02406	0.32	-1.3
2,687,945	+		MIT1002_02406	0.32	-1.9
2,687,947	+		MIT1002_02406	0.33	-0.7
2,687,950	-		MIT1002_02406	0.33	+0.3
2,687,968	+		MIT1002_02406	0.36	-1.3
2,688,190	+		MIT1002_02406	0.68	-0.1
2,688,205	+		MIT1002_02406	0.70	-0.7
2,688,470	+				-0.3
2,688,478	-				+0.1
2,688,480	-				-1.0
2,688,488	+				-0.1
2,688,565	+		MIT1002_02407	0.10	+0.8
2,688,845	+		MIT1002_02407	0.29	-0.7
2,688,891	+		MIT1002_02407	0.32	-0.3
2,688,973	+		MIT1002_02407	0.37	+0.3
2,689,127	+		MIT1002_02407	0.48	-2.0
2,689,240	+		MIT1002_02407	0.55	-0.1
2,689,240	+		MIT1002_02407	0.55	-0.3