Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02133

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
2,393,221	+		MIT1002_02132	0.25	+0.7
2,393,243	+		MIT1002_02132	0.28	-0.3
2,393,243	+		MIT1002_02132	0.28	-1.3
2,393,476	+		MIT1002_02132	0.52	-0.9
2,393,566	+		MIT1002_02132	0.61	-1.9
2,394,050	+				+0.9
2,394,179	-				-0.1
2,394,179	-				-1.2
2,394,325	-		MIT1002_02133	0.35	-0.5
2,394,384	+		MIT1002_02133	0.47	-1.2
2,394,384	+		MIT1002_02133	0.47	-2.1
2,394,387	-		MIT1002_02133	0.48	-3.0
2,394,456	+		MIT1002_02133	0.62	-0.1
2,394,456	+		MIT1002_02133	0.62	-0.3
2,394,524	+		MIT1002_02133	0.76	-1.6
2,394,612	-				-0.1
2,394,670	+				-0.9
2,394,740	-				-0.1
2,394,955	+		MIT1002_02134	0.13	-1.2
2,395,019	+		MIT1002_02134	0.16	-0.5
2,395,224	-		MIT1002_02134	0.24	+0.7
2,395,292	+		MIT1002_02134	0.27	-1.6
2,395,292	+		MIT1002_02134	0.27	-1.2
2,395,300	-		MIT1002_02134	0.27	-0.3
2,395,302	+		MIT1002_02134	0.27	-1.1
2,395,325	-		MIT1002_02134	0.28	-0.3
2,395,511	+		MIT1002_02134	0.36	-0.3
2,395,566	+		MIT1002_02134	0.38	-1.9
2,395,574	-		MIT1002_02134	0.38	-0.1