Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01925

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
2,137,334	-				+0.7
2,137,334	-				-1.3
2,137,415	-				+0.6
2,137,421	+				-0.1
2,137,434	-				+1.2
2,137,474	+				-0.5
2,137,474	+				+2.2
2,137,481	+				-1.0
2,137,481	+				-0.5
2,137,481	+				+1.2
2,137,489	-				+0.4
2,137,489	-				+1.3
2,137,599	-		MIT1002_01925	0.19	-0.9
2,137,963	+		MIT1002_01925	0.88	-2.0
2,137,971	-		MIT1002_01925	0.90	-0.9
2,138,093	+				-1.2
2,138,106	-				+6.8
2,138,113	+				-0.3
2,138,246	-				-2.8
2,138,336	+				+1.0
2,138,336	-				+2.4
2,138,344	-				-0.8
2,138,346	-				+0.5
2,138,360	+				+1.2
2,138,362	+				-0.3
2,138,460	+				+1.2
2,138,493	-				-1.2
2,138,493	-				+1.8
2,138,505	+		MIT1002_01926	0.10	+1.0
2,138,569	+		MIT1002_01926	0.13	-0.8
2,138,570	+		MIT1002_01926	0.13	-0.9
2,138,577	-		MIT1002_01926	0.13	-0.1
2,138,577	-		MIT1002_01926	0.13	-1.0
2,138,711	+		MIT1002_01926	0.18	+0.1
2,138,716	+		MIT1002_01926	0.19	+0.6
2,138,716	+		MIT1002_01926	0.19	+0.3
2,138,716	+		MIT1002_01926	0.19	+1.1
2,138,724	-		MIT1002_01926	0.19	+0.1
2,138,833	-		MIT1002_01926	0.23	+0.7
2,138,890	+		MIT1002_01926	0.25	+0.2
2,138,909	+		MIT1002_01926	0.26	-2.3
2,138,909	+		MIT1002_01926	0.26	+0.1
2,138,917	-		MIT1002_01926	0.26	-0.0
2,138,938	+		MIT1002_01926	0.27	+0.5
2,138,965	+		MIT1002_01926	0.28	+0.1
2,138,965	+		MIT1002_01926	0.28	-1.0
2,138,965	+		MIT1002_01926	0.28	+0.2