Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01693

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,881,093	+		MIT1002_01692	0.52	+0.2
1,881,101	-		MIT1002_01692	0.52	-0.1
1,881,260	-		MIT1002_01692	0.63	+0.6
1,881,301	+		MIT1002_01692	0.66	-0.2
1,881,318	-		MIT1002_01692	0.67	-0.6
1,881,331	-		MIT1002_01692	0.68	+0.4
1,881,352	+		MIT1002_01692	0.69	+0.9
1,881,359	+		MIT1002_01692	0.70	-0.2
1,881,359	+		MIT1002_01692	0.70	-0.7
1,881,359	+		MIT1002_01692	0.70	-0.5
1,881,374	-		MIT1002_01692	0.71	+0.9
1,881,462	+		MIT1002_01692	0.76	+0.3
1,881,489	+		MIT1002_01692	0.78	-0.4
1,881,504	-		MIT1002_01692	0.79	+1.1
1,881,508	+		MIT1002_01692	0.80	-2.0
1,881,536	-		MIT1002_01692	0.81	-0.2
1,881,579	+		MIT1002_01692	0.84	-1.4
1,881,594	-		MIT1002_01692	0.85	+0.6
1,881,610	+		MIT1002_01692	0.86	-0.3
1,881,610	+		MIT1002_01692	0.86	+0.7
1,881,618	-		MIT1002_01692	0.87	+0.3
1,881,618	-		MIT1002_01692	0.87	+0.5
1,881,623	+		MIT1002_01692	0.87	+1.2
1,881,623	+		MIT1002_01692	0.87	-1.7
1,881,683	-				+1.0
1,881,689	+				+1.1
1,881,758	-				+0.1
1,881,835	-				+1.0
1,881,847	+				+1.1
1,882,214	+				+0.4
1,882,224	+				-1.4
1,882,375	-		MIT1002_01696	0.32	+1.0
1,882,487	+				+0.2
1,882,617	-				-0.2
1,882,623	+				-0.9
1,882,815	+				-0.7
1,882,823	-				-0.3
1,882,850	-				+0.5
1,882,879	-				-1.0
1,882,879	-				+0.2
1,882,898	-				-1.0
1,883,070	-		MIT1002_01697	0.21	-0.9
1,883,085	+		MIT1002_01697	0.22	-0.5
1,883,093	-		MIT1002_01697	0.22	+1.5