Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01676

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,853,254	-		MIT1002_01675	0.50	-0.4
1,853,258	+		MIT1002_01675	0.50	-2.1
1,853,259	-		MIT1002_01675	0.50	-1.1
1,853,259	-		MIT1002_01675	0.50	+0.6
1,853,259	-		MIT1002_01675	0.50	-0.4
1,853,358	+		MIT1002_01675	0.56	+0.1
1,853,366	+		MIT1002_01675	0.56	-0.2
1,853,374	-		MIT1002_01675	0.57	-0.6
1,853,456	+		MIT1002_01675	0.62	-0.6
1,853,459	-		MIT1002_01675	0.62	-1.5
1,853,475	-		MIT1002_01675	0.63	+1.0
1,853,477	+		MIT1002_01675	0.63	+1.9
1,853,477	+		MIT1002_01675	0.63	+0.3
1,853,477	+		MIT1002_01675	0.63	+0.2
1,853,485	-		MIT1002_01675	0.64	-1.8
1,853,490	-		MIT1002_01675	0.64	-0.6
1,853,546	-		MIT1002_01675	0.67	-0.8
1,853,555	-		MIT1002_01675	0.68	+1.6
1,853,623	+		MIT1002_01675	0.72	+0.9
1,853,623	+		MIT1002_01675	0.72	-0.4
1,853,631	-		MIT1002_01675	0.72	+0.5
1,853,656	-		MIT1002_01675	0.74	+0.2
1,853,658	+		MIT1002_01675	0.74	-0.3
1,853,666	-		MIT1002_01675	0.75	+0.2
1,853,666	-		MIT1002_01675	0.75	-0.4
1,853,709	-		MIT1002_01675	0.77	-1.5
1,853,754	-		MIT1002_01675	0.80	+0.4
1,853,786	-		MIT1002_01675	0.82	+0.1
1,853,790	+		MIT1002_01675	0.82	-0.3
1,853,790	+		MIT1002_01675	0.82	-2.0
1,853,790	+		MIT1002_01675	0.82	+0.4
1,853,793	-		MIT1002_01675	0.82	-0.6
1,853,798	-		MIT1002_01675	0.83	+0.0
1,853,808	-		MIT1002_01675	0.83	+0.6
1,853,819	-		MIT1002_01675	0.84	-1.0
1,853,858	+		MIT1002_01675	0.86	-1.0
1,853,881	-		MIT1002_01675	0.88	-0.8
1,853,936	-				+0.3
1,853,978	-				+0.6
1,854,117	-				-0.3
1,854,143	+				-1.7
1,854,153	+				-1.2
1,854,158	-				-1.1
1,854,197	-				+0.2
1,854,559	-		MIT1002_01676	0.24	-2.6
1,855,680	+				-0.2
1,855,686	-				-0.3
1,855,686	-				-0.9
1,855,688	-				+0.7
1,855,688	-				+0.7
1,855,738	-				+0.8
1,855,857	-				+0.1
1,855,895	+				-1.0
1,855,927	+				-1.0
1,855,931	+				+1.1
1,855,931	+				+0.9
1,856,042	-				+0.5
1,856,187	+				-0.1
1,856,195	-				-0.1
1,856,204	-				-1.6
1,856,273	-		MIT1002_01677	0.10	-4.3
1,856,313	+		MIT1002_01677	0.11	-0.2
1,856,356	+		MIT1002_01677	0.12	+0.8
1,856,356	+		MIT1002_01677	0.12	+0.9
1,856,356	+		MIT1002_01677	0.12	+0.6
1,856,364	-		MIT1002_01677	0.13	-0.3
1,856,364	-		MIT1002_01677	0.13	-0.3
1,856,364	-		MIT1002_01677	0.13	-1.1
1,856,460	-		MIT1002_01677	0.15	-0.9
1,856,495	+		MIT1002_01677	0.16	-0.3
1,856,505	+		MIT1002_01677	0.16	-1.5
1,856,513	-		MIT1002_01677	0.17	-0.0
1,856,513	-		MIT1002_01677	0.17	+1.1
1,856,513	-		MIT1002_01677	0.17	-0.6
1,856,516	-		MIT1002_01677	0.17	-0.1
1,856,523	-		MIT1002_01677	0.17	+0.1
1,856,643	+		MIT1002_01677	0.20	-2.5