Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01599

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,760,724	-				-1.6
1,760,820	+				+1.0
1,760,820	+				-0.2
1,760,825	+				+1.0
1,760,828	-				+2.4
1,760,944	+				+0.1
1,760,980	-				+0.8
1,761,041	-				-1.0
1,761,051	-				-0.2
1,761,084	+				-1.6
1,761,164	-		MIT1002_01598	0.22	+0.1
1,761,204	+		MIT1002_01598	0.29	-0.4
1,761,219	+		MIT1002_01598	0.31	+0.5
1,761,311	-		MIT1002_01598	0.46	-0.5
1,761,326	+		MIT1002_01598	0.48	-0.4
1,761,492	-		MIT1002_01598	0.74	-0.6
1,761,704	-				+0.3
1,761,704	-				-0.0
1,761,933	-		MIT1002_01599	0.19	+1.5
1,761,957	-		MIT1002_01599	0.21	-1.4
1,761,969	+		MIT1002_01599	0.22	-0.1
1,761,969	+		MIT1002_01599	0.22	-1.0
1,761,969	+		MIT1002_01599	0.22	-1.7
1,761,977	-		MIT1002_01599	0.22	-1.1
1,761,977	-		MIT1002_01599	0.22	-0.9
1,761,977	-		MIT1002_01599	0.22	-0.1
1,761,988	+		MIT1002_01599	0.23	+0.1
1,762,108	+		MIT1002_01599	0.33	+0.2
1,762,113	-		MIT1002_01599	0.33	-0.2
1,762,116	-		MIT1002_01599	0.33	-0.1
1,762,116	-		MIT1002_01599	0.33	+0.5
1,762,121	-		MIT1002_01599	0.34	-0.7
1,762,196	+		MIT1002_01599	0.40	-2.2
1,762,267	+		MIT1002_01599	0.45	-2.4
1,762,267	+		MIT1002_01599	0.45	-0.3
1,762,273	-		MIT1002_01599	0.46	-1.2
1,762,433	+		MIT1002_01599	0.59	-0.5
1,762,443	+		MIT1002_01599	0.59	+1.5
1,762,443	+		MIT1002_01599	0.59	+0.1
1,762,443	+		MIT1002_01599	0.59	+2.4
1,762,443	+		MIT1002_01599	0.59	-0.1
1,762,451	-		MIT1002_01599	0.60	+0.1
1,762,465	+		MIT1002_01599	0.61	-0.2
1,762,465	+		MIT1002_01599	0.61	+1.4
1,762,473	-		MIT1002_01599	0.62	+0.8
1,762,473	-		MIT1002_01599	0.62	-0.1
1,762,492	+		MIT1002_01599	0.63	-0.8
1,762,506	+		MIT1002_01599	0.64	-1.3
1,762,521	-		MIT1002_01599	0.66	+0.2
1,762,580	-		MIT1002_01599	0.70	-0.6
1,762,655	+		MIT1002_01599	0.76	-1.9
1,762,746	+		MIT1002_01599	0.83	-0.3
1,762,793	-		MIT1002_01599	0.87	-1.0
1,762,822	+		MIT1002_01599	0.90	+1.0
1,762,830	-				+0.3
1,762,840	-				-0.4
1,762,840	-				-0.9
1,762,893	-				+0.3
1,763,023	+				+0.9
1,763,055	-				-0.2
1,763,055	-				+0.5
1,763,055	-				+0.5
1,763,128	+				+0.2
1,763,184	+				-0.5
1,763,187	+				+0.1
1,763,192	+				-0.3
1,763,216	+				-0.6
1,763,245	+		MIT1002_01600	0.12	+1.0
1,763,260	+		MIT1002_01600	0.13	+0.0
1,763,313	+		MIT1002_01600	0.18	-0.2
1,763,321	-		MIT1002_01600	0.18	-0.3
1,763,390	+		MIT1002_01600	0.24	-0.1
1,763,390	+		MIT1002_01600	0.24	+1.9
1,763,390	+		MIT1002_01600	0.24	-1.7
1,763,398	-		MIT1002_01600	0.25	+0.8
1,763,398	-		MIT1002_01600	0.25	-0.3
1,763,400	+		MIT1002_01600	0.25	+0.2
1,763,460	+		MIT1002_01600	0.30	-1.0
1,763,468	-		MIT1002_01600	0.31	-0.3
1,763,480	-		MIT1002_01600	0.32	-0.0
1,763,529	-		MIT1002_01600	0.36	-0.2
1,763,540	+		MIT1002_01600	0.37	-0.4
1,763,548	-		MIT1002_01600	0.37	-0.5
1,763,548	-		MIT1002_01600	0.37	+0.0
1,763,609	+		MIT1002_01600	0.43	-0.0
1,763,751	+		MIT1002_01600	0.55	-0.2
1,763,773	+		MIT1002_01600	0.56	+0.9
1,763,779	-		MIT1002_01600	0.57	-1.5
1,763,831	-		MIT1002_01600	0.61	-0.2
1,763,843	+		MIT1002_01600	0.62	+0.4
1,763,880	-		MIT1002_01600	0.65	-0.4
1,763,890	+		MIT1002_01600	0.66	-0.5