Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01444

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,587,536	+		MIT1002_01443	0.66	-0.2
1,587,578	+		MIT1002_01443	0.68	+0.8
1,587,586	-		MIT1002_01443	0.69	+0.8
1,587,591	+		MIT1002_01443	0.69	-0.7
1,587,695	+		MIT1002_01443	0.75	+0.3
1,587,696	+		MIT1002_01443	0.75	-0.0
1,587,696	+		MIT1002_01443	0.75	+1.2
1,587,882	+		MIT1002_01443	0.86	+1.1
1,587,890	-		MIT1002_01443	0.87	-1.0
1,587,970	+				-1.5
1,588,021	-				-1.4
1,588,026	+				+0.2
1,588,034	-				-0.4
1,588,336	+				+0.4
1,588,432	+				+0.8
1,588,475	+				-0.1
1,588,484	-				-0.5
1,588,510	-				+1.4
1,588,537	+				-1.2
1,588,537	+				-1.7
1,588,545	-				-0.1
1,588,545	-				+1.3
1,588,545	-				+0.5
1,588,560	+				+1.6
1,588,645	+		MIT1002_01444	0.26	+0.8
1,588,645	+		MIT1002_01444	0.26	+2.0
1,588,651	-		MIT1002_01444	0.27	-0.8
1,588,676	-		MIT1002_01444	0.32	-0.9
1,588,676	-		MIT1002_01444	0.32	+1.1
1,588,687	+		MIT1002_01444	0.34	+0.6
1,588,695	-		MIT1002_01444	0.36	+2.1
1,588,695	-		MIT1002_01444	0.36	+0.3
1,588,695	-		MIT1002_01444	0.36	+0.0
1,588,711	+		MIT1002_01444	0.39	+1.2
1,588,721	+		MIT1002_01444	0.41	+0.4
1,588,776	-		MIT1002_01444	0.52	-0.7
1,588,852	-		MIT1002_01444	0.67	+0.9
1,588,952	-		MIT1002_01444	0.86	+0.5
1,588,960	+		MIT1002_01444	0.88	+0.1
1,589,270	-				+1.0
1,589,296	+				-2.0