Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01435

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,578,325	-		MIT1002_01433	0.56	+0.4
1,578,406	-		MIT1002_01433	0.66	+1.0
1,578,432	+		MIT1002_01433	0.69	-0.3
1,578,440	-		MIT1002_01433	0.70	-0.4
1,578,461	+		MIT1002_01433	0.72	-2.7
1,578,461	+		MIT1002_01433	0.72	+1.4
1,578,480	+		MIT1002_01433	0.74	-0.6
1,578,521	+		MIT1002_01433	0.79	+0.8
1,578,572	+		MIT1002_01433	0.85	-1.8
1,578,579	+		MIT1002_01433	0.86	-0.8
1,578,580	-		MIT1002_01433	0.86	+0.1
1,578,583	+		MIT1002_01433	0.86	+0.6
1,578,719	-				-1.2
1,578,914	+		MIT1002_01434	0.38	+0.9
1,578,983	+		MIT1002_01434	0.50	+0.5
1,578,983	+		MIT1002_01434	0.50	-0.1
1,579,009	+		MIT1002_01434	0.54	+0.4
1,579,009	+		MIT1002_01434	0.54	-0.2
1,579,035	+		MIT1002_01434	0.58	-0.8
1,579,035	+		MIT1002_01434	0.58	-0.7
1,579,035	+		MIT1002_01434	0.58	-0.4
1,579,035	+		MIT1002_01434	0.58	+1.4
1,579,035	+		MIT1002_01434	0.58	+0.2
1,579,035	+		MIT1002_01434	0.58	+0.1
1,579,043	-		MIT1002_01434	0.60	+0.6
1,579,091	+		MIT1002_01434	0.68	+0.3
1,579,091	+		MIT1002_01434	0.68	-1.8
1,579,097	+		MIT1002_01434	0.69	-1.7
1,579,276	+				-1.1
1,579,439	-		MIT1002_01435	0.13	-0.2
1,579,543	-		MIT1002_01435	0.25	-0.9
1,579,640	+		MIT1002_01435	0.35	-1.6
1,579,744	-		MIT1002_01435	0.47	+0.1
1,579,787	+		MIT1002_01435	0.52	+0.4
1,580,179	-				-0.9
1,580,250	+				+0.3
1,580,250	+				+1.5
1,580,401	-				-0.5
1,580,414	-				+0.8
1,580,437	+				+0.1
1,580,535	+		MIT1002_01436	0.11	+0.9
1,580,545	+		MIT1002_01436	0.12	-0.6
1,580,553	-		MIT1002_01436	0.13	-0.6
1,580,641	+		MIT1002_01436	0.24	+0.3
1,580,641	+		MIT1002_01436	0.24	-0.8
1,580,750	-		MIT1002_01436	0.38	+2.8
1,580,972	-		MIT1002_01436	0.65	-0.7
1,580,978	+		MIT1002_01436	0.66	-1.1
1,581,033	-		MIT1002_01436	0.73	-0.7
1,581,035	+		MIT1002_01436	0.73	-1.6
1,581,076	-		MIT1002_01436	0.78	+0.3
1,581,086	-		MIT1002_01436	0.79	-0.3
1,581,154	-		MIT1002_01436	0.88	+0.1
1,581,156	+		MIT1002_01436	0.88	+1.3
1,581,164	-		MIT1002_01436	0.89	+2.4