Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01235

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,359,574	+				-0.4
1,359,574	-				-0.2
1,359,584	-				-0.8
1,359,584	-				+0.3
1,359,608	-				-0.1
1,360,284	-				-2.1
1,360,296	-				-0.9
1,360,436	+				+0.9
1,360,454	-				-0.5
1,360,480	-				-0.5
1,360,629	+		MIT1002_01235	0.24	-1.2
1,360,632	-		MIT1002_01235	0.25	-2.0
1,360,637	-		MIT1002_01235	0.26	-2.0
1,360,670	+		MIT1002_01235	0.36	-0.9
1,360,674	+		MIT1002_01235	0.37	-1.1
1,360,783	+		MIT1002_01235	0.68	-1.9
1,360,876	+				-0.8
1,360,897	-				-0.3
1,360,897	-				-0.9
1,361,136	+				+0.1
1,361,144	-				+0.5
1,361,238	-				-0.3
1,361,238	-				+0.2
1,361,240	-				-1.4
1,361,330	+				-0.4
1,361,330	+				+0.4
1,361,336	-				-0.7
1,361,338	-				+0.8
1,361,486	-				+0.3
1,361,543	-		MIT1002_01236	0.12	+0.3
1,361,553	+		MIT1002_01236	0.13	-0.8
1,361,553	-		MIT1002_01236	0.13	-1.5
1,361,560	+		MIT1002_01236	0.13	-1.7
1,361,587	+		MIT1002_01236	0.14	+0.1
1,361,611	-		MIT1002_01236	0.15	+1.3
1,361,619	+		MIT1002_01236	0.15	+0.7
1,361,619	+		MIT1002_01236	0.15	-0.4
1,361,661	+		MIT1002_01236	0.17	-0.3
1,361,661	+		MIT1002_01236	0.17	+0.4
1,361,669	-		MIT1002_01236	0.17	+2.5
1,361,717	+		MIT1002_01236	0.19	-0.1
1,361,746	-		MIT1002_01236	0.20	+1.6
1,361,748	+		MIT1002_01236	0.20	+1.0
1,361,756	-		MIT1002_01236	0.20	+0.3
1,361,819	+		MIT1002_01236	0.23	-0.6
1,361,848	-		MIT1002_01236	0.24	-1.6
1,361,876	+		MIT1002_01236	0.25	-2.5
1,361,879	-		MIT1002_01236	0.25	+0.3
1,361,891	+		MIT1002_01236	0.26	-0.4