Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01021

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
1,131,340	+				-0.9
1,131,478	+				+0.3
1,131,486	-				+0.5
1,131,486	-				+1.4
1,131,523	+				+0.6
1,131,531	-				-1.4
1,131,544	+				+0.3
1,131,643	+		MIT1002_01021	0.18	-2.0
1,131,660	-		MIT1002_01021	0.20	+0.8
1,131,662	+		MIT1002_01021	0.20	-0.5
1,131,662	+		MIT1002_01021	0.20	-1.0
1,131,665	-		MIT1002_01021	0.20	+1.0
1,131,670	-		MIT1002_01021	0.21	+0.6
1,131,692	-		MIT1002_01021	0.23	+0.0
1,131,709	-		MIT1002_01021	0.25	+0.1
1,131,855	-		MIT1002_01021	0.42	-0.9
1,131,928	+		MIT1002_01021	0.50	-0.5
1,131,928	+		MIT1002_01021	0.50	-1.2
1,131,971	-		MIT1002_01021	0.54	-2.9
1,132,139	-		MIT1002_01021	0.73	+0.4
1,132,139	-		MIT1002_01021	0.73	+0.5
1,132,153	+		MIT1002_01021	0.75	-1.1
1,132,153	+		MIT1002_01021	0.75	-0.1
1,132,161	-		MIT1002_01021	0.76	-0.2
1,132,161	-		MIT1002_01021	0.76	-0.6
1,132,192	+		MIT1002_01021	0.79	-2.4
1,132,318	+				+0.7
1,132,318	+				-0.0
1,132,326	-				-0.4
1,132,352	-				-0.6
1,132,354	+				-0.8
1,132,354	+				-0.0
1,132,390	-				+0.4
1,132,432	+				+0.8
1,132,818	+				+0.3
1,132,916	-		MIT1002_01022	0.14	-0.1
1,132,938	+		MIT1002_01022	0.15	-0.6
1,132,946	-		MIT1002_01022	0.15	-3.2
1,132,948	-		MIT1002_01022	0.15	+1.6
1,132,956	-		MIT1002_01022	0.16	+1.5
1,133,025	+		MIT1002_01022	0.19	+0.2
1,133,041	+		MIT1002_01022	0.20	+0.6
1,133,068	+		MIT1002_01022	0.22	+1.4
1,133,115	-		MIT1002_01022	0.24	-0.1
1,133,147	+		MIT1002_01022	0.26	-1.5
1,133,170	-		MIT1002_01022	0.27	+1.6
1,133,177	+		MIT1002_01022	0.27	+1.0
1,133,185	-		MIT1002_01022	0.27	-0.8
1,133,195	+		MIT1002_01022	0.28	-2.7
1,133,195	+		MIT1002_01022	0.28	-1.0
1,133,203	-		MIT1002_01022	0.28	-0.9
1,133,203	-		MIT1002_01022	0.28	+1.0
1,133,203	-		MIT1002_01022	0.28	-1.2
1,133,243	-		MIT1002_01022	0.30	+1.6
1,133,243	-		MIT1002_01022	0.30	+0.5
1,133,250	+		MIT1002_01022	0.31	-1.2
1,133,284	-		MIT1002_01022	0.33	-0.0
1,133,298	+		MIT1002_01022	0.33	+0.2
1,133,324	+		MIT1002_01022	0.35	-1.4