Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00133

Experiment: monoculture; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 2
141,325	+		MIT1002_00131	0.54	-0.8
141,333	-		MIT1002_00131	0.57	+0.0
141,333	-		MIT1002_00131	0.57	+0.6
141,335	+		MIT1002_00131	0.58	-0.6
141,343	-		MIT1002_00131	0.60	+0.5
141,449	+				-0.1
141,457	-				+3.6
141,478	-				+1.7
141,548	-				-0.9
141,711	+		MIT1002_00132	0.36	+0.4
141,729	+		MIT1002_00132	0.40	-0.1
141,729	+		MIT1002_00132	0.40	+1.2
141,737	+		MIT1002_00132	0.42	-0.1
141,737	+		MIT1002_00132	0.42	+0.7
141,739	+		MIT1002_00132	0.42	-2.5
141,811	-		MIT1002_00132	0.57	+2.8
141,915	-		MIT1002_00132	0.80	+0.6
141,922	-		MIT1002_00132	0.81	-1.2
141,965	+				+0.5
141,981	-				-1.9
142,000	-				-0.5
142,012	+				-0.6
142,017	+				-0.7
142,017	+				-1.4
142,025	-				-0.7
142,035	-				+0.5
142,040	+				+0.1
142,048	-				+0.1
142,081	-				-0.8
142,135	+				+0.4
142,195	+				-0.7
142,239	+				-0.7
142,247	-				-0.7
142,260	+				+0.9
142,261	+				-1.2
142,262	-				-0.7
142,279	-				-0.2
142,283	+				-2.3
142,328	-				+0.7
142,337	-				-0.1
142,404	-		MIT1002_00133	0.15	-0.2
142,404	-		MIT1002_00133	0.15	-0.0
142,475	+		MIT1002_00133	0.25	+0.4
142,528	+		MIT1002_00133	0.33	-0.4
142,538	+		MIT1002_00133	0.34	+0.1
142,546	-		MIT1002_00133	0.35	+0.8
142,546	-		MIT1002_00133	0.35	-1.8
142,684	-		MIT1002_00133	0.54	+1.4
142,684	-		MIT1002_00133	0.54	-1.1
142,702	+		MIT1002_00133	0.57	-1.2
142,703	-		MIT1002_00133	0.57	+2.7
142,740	-		MIT1002_00133	0.62	-0.5
142,813	+		MIT1002_00133	0.72	-1.7
142,813	+		MIT1002_00133	0.72	-0.3
142,813	+		MIT1002_00133	0.72	-0.5
142,813	+		MIT1002_00133	0.72	+2.0
142,813	+		MIT1002_00133	0.72	+0.2
142,813	+		MIT1002_00133	0.72	+1.3
142,813	+		MIT1002_00133	0.72	-0.7
142,813	+		MIT1002_00133	0.72	-1.5
142,821	-		MIT1002_00133	0.73	+0.3
142,821	-		MIT1002_00133	0.73	-0.8
142,821	-		MIT1002_00133	0.73	-2.8
142,821	-		MIT1002_00133	0.73	+0.4
142,821	-		MIT1002_00133	0.73	-1.2
142,837	+		MIT1002_00133	0.76	-0.5
142,848	+		MIT1002_00133	0.77	+0.9
142,856	-		MIT1002_00133	0.78	+1.1
142,859	+		MIT1002_00133	0.79	-0.1
142,937	+		MIT1002_00133	0.89	+0.1
142,990	-				-1.2
143,024	-				+0.2
143,131	+				+0.3
143,138	+				+0.2
143,148	+				-0.4
143,156	-				-1.4
143,156	-				-0.5
143,169	+				+0.8
143,184	+				-1.9
143,204	+				-1.5
143,234	-				+0.3
143,296	-				-0.7
143,296	-				-0.1
143,360	+				+0.4
143,387	+				+0.6
143,417	+				-0.4
143,417	+				+1.1
143,420	-				-1.1
143,435	-				-0.1
143,435	-				-0.5
143,491	+		MIT1002_00134	0.14	-0.3
143,504	+		MIT1002_00134	0.15	-1.2
143,504	+		MIT1002_00134	0.15	-0.1
143,504	+		MIT1002_00134	0.15	-0.9
143,579	+		MIT1002_00134	0.22	-1.8
143,617	+		MIT1002_00134	0.25	-0.3
143,638	+		MIT1002_00134	0.27	-2.5
143,638	+		MIT1002_00134	0.27	+0.6
143,640	+		MIT1002_00134	0.27	-0.1
143,646	-		MIT1002_00134	0.28	-0.0
143,646	-		MIT1002_00134	0.28	+0.6
143,646	-		MIT1002_00134	0.28	-1.4
143,646	-		MIT1002_00134	0.28	+0.3
143,648	-		MIT1002_00134	0.28	+1.6
143,682	+		MIT1002_00134	0.31	-0.3
143,691	-		MIT1002_00134	0.32	-0.1
143,711	-		MIT1002_00134	0.33	-0.3
143,813	-		MIT1002_00134	0.42	-0.3
143,855	-		MIT1002_00134	0.46	-0.4
143,876	+		MIT1002_00134	0.48	-3.2
143,942	+		MIT1002_00134	0.53	+1.2
143,950	-		MIT1002_00134	0.54	-0.0
143,950	-		MIT1002_00134	0.54	+1.1
143,950	-		MIT1002_00134	0.54	-0.3
143,961	+		MIT1002_00134	0.55	+0.5
143,981	+		MIT1002_00134	0.57	-1.6
144,010	-		MIT1002_00134	0.59	-0.8