Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31265 and QEN71_RS31270 are separated by 55 nucleotides QEN71_RS31270 and QEN71_RS31275 are separated by 255 nucleotides
QEN71_RS31265: QEN71_RS31265 - NmrA family NAD(P)-binding protein, at 363,089 to 363,967
_RS31265
QEN71_RS31270: QEN71_RS31270 - NmrA family NAD(P)-binding protein, at 364,023 to 364,916
_RS31270
QEN71_RS31275: QEN71_RS31275 - LysR family transcriptional regulator, at 365,172 to 366,080
_RS31275
Position (kb) 364
365 Strain fitness (log2 ratio) -2
-1
0
1 at 363.276 kb on + strand, within QEN71_RS31265 at 364.255 kb on + strand, within QEN71_RS31270 at 364.351 kb on + strand, within QEN71_RS31270 at 364.352 kb on - strand, within QEN71_RS31270 at 364.448 kb on - strand, within QEN71_RS31270 at 364.477 kb on + strand, within QEN71_RS31270 at 364.478 kb on - strand, within QEN71_RS31270 at 364.705 kb on + strand, within QEN71_RS31270 at 364.705 kb on + strand, within QEN71_RS31270 at 364.900 kb on - strand at 364.923 kb on + strand at 364.923 kb on + strand at 364.923 kb on + strand at 364.924 kb on - strand at 365.100 kb on - strand at 365.100 kb on - strand at 365.437 kb on + strand, within QEN71_RS31275 at 365.438 kb on - strand, within QEN71_RS31275 at 365.680 kb on - strand, within QEN71_RS31275 at 365.696 kb on + strand, within QEN71_RS31275 at 365.696 kb on + strand, within QEN71_RS31275 at 365.914 kb on + strand, within QEN71_RS31275
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 363,276 + QEN71_RS31265 0.21 +0.2 364,255 + QEN71_RS31270 0.26 -1.2 364,351 + QEN71_RS31270 0.37 -0.2 364,352 - QEN71_RS31270 0.37 -0.3 364,448 - QEN71_RS31270 0.48 -0.4 364,477 + QEN71_RS31270 0.51 -0.3 364,478 - QEN71_RS31270 0.51 -0.2 364,705 + QEN71_RS31270 0.76 -1.2 364,705 + QEN71_RS31270 0.76 +1.0 364,900 - -0.9 364,923 + -0.0 364,923 + +0.0 364,923 + +1.1 364,924 - -1.0 365,100 - -0.3 365,100 - -0.0 365,437 + QEN71_RS31275 0.29 -2.0 365,438 - QEN71_RS31275 0.29 +0.9 365,680 - QEN71_RS31275 0.56 -0.8 365,696 + QEN71_RS31275 0.58 -0.7 365,696 + QEN71_RS31275 0.58 -0.9 365,914 + QEN71_RS31275 0.82 +0.2
Or see this region's nucleotide sequence