Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS12515

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
2,801,780	+		QEN71_RS12505	0.51	+1.1
2,801,780	+		QEN71_RS12505	0.51	-0.7
2,801,780	+		QEN71_RS12505	0.51	-0.7
2,801,813	+		QEN71_RS12505	0.56	-0.7
2,801,813	+		QEN71_RS12505	0.56	+0.2
2,801,813	+		QEN71_RS12505	0.56	+0.3
2,801,813	+		QEN71_RS12505	0.56	-0.9
2,801,813	+		QEN71_RS12505	0.56	-0.6
2,801,813	+		QEN71_RS12505	0.56	+0.8
2,801,814	-		QEN71_RS12505	0.56	+0.2
2,801,814	-		QEN71_RS12505	0.56	-0.6
2,801,814	-		QEN71_RS12505	0.56	-0.1
2,801,814	-		QEN71_RS12505	0.56	+0.5
2,801,879	+		QEN71_RS12505	0.64	-0.5
2,801,880	-		QEN71_RS12505	0.64	+0.1
2,801,880	-		QEN71_RS12505	0.64	-0.3
2,801,921	+		QEN71_RS12505	0.70	+0.2
2,801,921	+		QEN71_RS12505	0.70	+0.3
2,801,921	+		QEN71_RS12505	0.70	-0.2
2,801,921	+		QEN71_RS12505	0.70	+0.4
2,801,921	+		QEN71_RS12505	0.70	-0.0
2,801,921	+		QEN71_RS12505	0.70	+0.1
2,801,921	+		QEN71_RS12505	0.70	-0.8
2,801,921	+		QEN71_RS12505	0.70	-0.5
2,801,922	-		QEN71_RS12505	0.70	-1.1
2,801,922	-		QEN71_RS12505	0.70	-0.8
2,801,922	-		QEN71_RS12505	0.70	-0.1
2,802,144	+				-1.1
2,802,144	+				-0.5
2,802,144	+				-0.5
2,802,144	+				-0.4
2,802,144	+				-0.3
2,802,144	+				-1.8
2,802,144	+				+0.5
2,802,144	+				-1.7
2,802,144	+				-2.1
2,802,144	+				-0.4
2,802,144	+				-0.7
2,802,145	-				-1.6
2,802,145	-				+0.6
2,802,145	-				+0.3
2,802,145	-				+0.6
2,802,145	-				-1.0
2,802,145	-				+0.1
2,802,168	+				-2.8
2,802,230	+		QEN71_RS12510	0.24	-0.1
2,802,230	+		QEN71_RS12510	0.24	-0.1
2,802,230	+		QEN71_RS12510	0.24	-0.1
2,802,230	+		QEN71_RS12510	0.24	+0.3
2,802,230	+		QEN71_RS12510	0.24	-0.2
2,802,230	+		QEN71_RS12510	0.24	-0.1
2,802,230	+		QEN71_RS12510	0.24	+1.6
2,802,230	+		QEN71_RS12510	0.24	-1.2
2,802,230	+		QEN71_RS12510	0.24	-0.6
2,802,230	+		QEN71_RS12510	0.24	-0.0
2,802,230	+		QEN71_RS12510	0.24	-0.1
2,802,230	+		QEN71_RS12510	0.24	-0.6
2,802,230	+		QEN71_RS12510	0.24	+1.7
2,802,230	+		QEN71_RS12510	0.24	-0.2
2,802,230	+		QEN71_RS12510	0.24	+0.3
2,802,230	+		QEN71_RS12510	0.24	+1.3
2,802,230	+		QEN71_RS12510	0.24	+0.0
2,802,230	+		QEN71_RS12510	0.24	-0.4
2,802,230	+		QEN71_RS12510	0.24	-0.8
2,802,230	+		QEN71_RS12510	0.24	+0.4
2,802,230	+		QEN71_RS12510	0.24	-0.5
2,802,230	+		QEN71_RS12510	0.24	-0.1
2,802,230	+		QEN71_RS12510	0.24	-0.8
2,802,230	+		QEN71_RS12510	0.24	-0.8
2,802,230	+		QEN71_RS12510	0.24	+0.0
2,802,230	+		QEN71_RS12510	0.24	-0.7
2,802,230	+		QEN71_RS12510	0.24	-0.9
2,802,230	+		QEN71_RS12510	0.24	+0.2
2,802,230	+		QEN71_RS12510	0.24	-0.6
2,802,230	+		QEN71_RS12510	0.24	-0.0
2,802,231	-		QEN71_RS12510	0.25	-1.0
2,802,231	-		QEN71_RS12510	0.25	-0.1
2,802,231	-		QEN71_RS12510	0.25	-0.5
2,802,231	-		QEN71_RS12510	0.25	+0.2
2,802,231	-		QEN71_RS12510	0.25	-0.8
2,802,231	-		QEN71_RS12510	0.25	+0.2
2,802,231	-		QEN71_RS12510	0.25	+0.0
2,802,231	-		QEN71_RS12510	0.25	-0.8
2,802,231	-		QEN71_RS12510	0.25	+0.4
2,802,231	-		QEN71_RS12510	0.25	-1.7
2,802,231	-		QEN71_RS12510	0.25	+0.4
2,802,231	-		QEN71_RS12510	0.25	+0.5
2,802,231	-		QEN71_RS12510	0.25	+0.3
2,802,231	-		QEN71_RS12510	0.25	+1.4
2,802,231	-		QEN71_RS12510	0.25	-0.1
2,802,231	-		QEN71_RS12510	0.25	-0.4
2,802,231	-		QEN71_RS12510	0.25	-0.9
2,802,231	-		QEN71_RS12510	0.25	+0.1
2,802,231	-		QEN71_RS12510	0.25	-1.9
2,802,231	-		QEN71_RS12510	0.25	-0.5
2,802,231	-		QEN71_RS12510	0.25	-2.8
2,802,231	-		QEN71_RS12510	0.25	+1.5
2,802,231	-		QEN71_RS12510	0.25	-0.2
2,802,231	-		QEN71_RS12510	0.25	-0.3
2,802,231	-		QEN71_RS12510	0.25	-0.5
2,802,231	-		QEN71_RS12510	0.25	+0.1
2,802,231	-		QEN71_RS12510	0.25	-1.0
2,802,231	-		QEN71_RS12510	0.25	-0.4
2,802,231	-		QEN71_RS12510	0.25	+0.9
2,802,231	-		QEN71_RS12510	0.25	-0.2
2,802,278	+		QEN71_RS12510	0.46	+1.1
2,802,278	+		QEN71_RS12510	0.46	-0.2
2,802,278	+		QEN71_RS12510	0.46	-0.0
2,802,279	-		QEN71_RS12510	0.46	-1.0
2,802,279	-		QEN71_RS12510	0.46	+0.1
2,802,279	-		QEN71_RS12510	0.46	-0.5
2,802,279	-		QEN71_RS12510	0.46	-0.3
2,802,279	-		QEN71_RS12510	0.46	+0.3
2,802,279	-		QEN71_RS12510	0.46	-0.6
2,802,498	-				-0.2
2,802,515	+				+0.1
2,802,515	+				+0.4
2,802,515	+				-0.8
2,802,515	+				-0.2
2,802,515	+				-1.7
2,802,516	-				-0.3
2,802,516	-				+0.4
2,802,516	-				+0.6
2,802,516	-				-0.2
2,802,570	+				-0.7
2,802,570	+				-0.2
2,802,570	+				-0.1
2,802,570	+				-1.0
2,802,570	+				-0.3
2,802,570	+				-0.5
2,802,571	-				-0.9
2,802,571	-				+0.4
2,802,571	-				+0.0
2,802,571	-				+0.0
2,802,575	+				+1.9
2,802,575	+				-1.4
2,802,576	-				+0.1
2,802,576	-				+0.1
2,802,576	-				-0.7
2,802,576	-				+0.5
2,802,623	+				-0.1
2,802,623	+				-0.1
2,802,623	+				+0.1
2,802,623	+				-0.4
2,802,623	+				+1.0
2,802,623	+				-0.7
2,802,623	+				+0.0
2,802,623	+				-1.1
2,802,623	+				-1.0
2,802,623	+				+0.2
2,802,623	+				-0.3
2,802,624	-				-0.4
2,802,624	-				-0.5
2,802,624	-				-0.9
2,802,624	-				-0.8
2,802,624	-				+0.1
2,802,624	-				+0.7
2,802,624	-				-0.4
2,802,624	-				-0.4
2,802,624	-				-0.1
2,802,624	-				+1.1
2,802,874	+		QEN71_RS12515	0.39	-0.6
2,802,874	+		QEN71_RS12515	0.39	-0.0
2,803,089	+		QEN71_RS12515	0.74	-0.5
2,803,089	+		QEN71_RS12515	0.74	-2.2
2,803,089	+		QEN71_RS12515	0.74	-0.3
2,803,089	+		QEN71_RS12515	0.74	-0.2
2,803,089	+		QEN71_RS12515	0.74	+0.3
2,803,089	+		QEN71_RS12515	0.74	+1.4
2,803,089	+		QEN71_RS12515	0.74	-0.2
2,803,089	+		QEN71_RS12515	0.74	+0.1
2,803,089	+		QEN71_RS12515	0.74	-0.8
2,803,089	+		QEN71_RS12515	0.74	-0.2
2,803,089	+		QEN71_RS12515	0.74	-0.8
2,803,089	+		QEN71_RS12515	0.74	+0.2
2,803,089	+		QEN71_RS12515	0.74	-0.6
2,803,089	+		QEN71_RS12515	0.74	-1.3
2,803,089	+		QEN71_RS12515	0.74	-1.6
2,803,089	+		QEN71_RS12515	0.74	-0.4
2,803,089	+		QEN71_RS12515	0.74	-1.1
2,803,089	+		QEN71_RS12515	0.74	+0.9
2,803,089	+		QEN71_RS12515	0.74	+0.5
2,803,090	-		QEN71_RS12515	0.74	-0.3
2,803,090	-		QEN71_RS12515	0.74	+1.1
2,803,090	-		QEN71_RS12515	0.74	-0.9
2,803,090	-		QEN71_RS12515	0.74	-0.7
2,803,090	-		QEN71_RS12515	0.74	+1.8
2,803,090	-		QEN71_RS12515	0.74	+0.3
2,803,090	-		QEN71_RS12515	0.74	+0.2
2,803,090	-		QEN71_RS12515	0.74	+0.5
2,803,090	-		QEN71_RS12515	0.74	+0.4
2,803,090	-		QEN71_RS12515	0.74	-0.1
2,803,090	-		QEN71_RS12515	0.74	-1.3
2,803,090	-		QEN71_RS12515	0.74	+0.2
2,803,090	-		QEN71_RS12515	0.74	-0.1
2,803,090	-		QEN71_RS12515	0.74	-0.5
2,803,090	-		QEN71_RS12515	0.74	-0.7
2,803,090	-		QEN71_RS12515	0.74	+0.0
2,803,090	-		QEN71_RS12515	0.74	-0.6
2,803,090	-		QEN71_RS12515	0.74	+0.7
2,803,090	-		QEN71_RS12515	0.74	-0.1
2,803,090	-		QEN71_RS12515	0.74	-0.3
2,803,090	-		QEN71_RS12515	0.74	+0.1
2,803,090	-		QEN71_RS12515	0.74	+0.1
2,803,090	-		QEN71_RS12515	0.74	-1.9
2,803,091	+		QEN71_RS12515	0.74	-0.1
2,803,091	+		QEN71_RS12515	0.74	-1.3
2,803,091	+		QEN71_RS12515	0.74	+1.1
2,803,091	+		QEN71_RS12515	0.74	+1.3
2,803,091	+		QEN71_RS12515	0.74	-0.4
2,803,091	+		QEN71_RS12515	0.74	+0.3
2,803,091	+		QEN71_RS12515	0.74	-0.7
2,803,091	+		QEN71_RS12515	0.74	-0.9
2,803,091	+		QEN71_RS12515	0.74	-0.2
2,803,091	+		QEN71_RS12515	0.74	+0.4
2,803,091	+		QEN71_RS12515	0.74	+0.2
2,803,091	+		QEN71_RS12515	0.74	+0.5
2,803,091	+		QEN71_RS12515	0.74	-0.2
2,803,091	+		QEN71_RS12515	0.74	-0.2
2,803,091	+		QEN71_RS12515	0.74	+0.7
2,803,091	+		QEN71_RS12515	0.74	-0.4
2,803,091	+		QEN71_RS12515	0.74	-0.2
2,803,091	+		QEN71_RS12515	0.74	-0.3
2,803,091	+		QEN71_RS12515	0.74	+0.3
2,803,091	+		QEN71_RS12515	0.74	+0.6
2,803,091	+		QEN71_RS12515	0.74	-0.0
2,803,091	+		QEN71_RS12515	0.74	+0.7
2,803,091	+		QEN71_RS12515	0.74	+0.4
2,803,092	-		QEN71_RS12515	0.74	-0.3
2,803,092	-		QEN71_RS12515	0.74	+0.2
2,803,092	-		QEN71_RS12515	0.74	-0.9
2,803,092	-		QEN71_RS12515	0.74	-0.1
2,803,092	-		QEN71_RS12515	0.74	+0.2
2,803,092	-		QEN71_RS12515	0.74	+1.1
2,803,092	-		QEN71_RS12515	0.74	-1.6
2,803,092	-		QEN71_RS12515	0.74	-0.1
2,803,092	-		QEN71_RS12515	0.74	+1.7
2,803,092	-		QEN71_RS12515	0.74	+0.7
2,803,092	-		QEN71_RS12515	0.74	+0.2
2,803,092	-		QEN71_RS12515	0.74	+0.2
2,803,092	-		QEN71_RS12515	0.74	+1.6
2,803,092	-		QEN71_RS12515	0.74	+0.3
2,803,092	-		QEN71_RS12515	0.74	-0.3
2,803,092	-		QEN71_RS12515	0.74	-0.3
2,803,092	-		QEN71_RS12515	0.74	-0.4
2,803,092	-		QEN71_RS12515	0.74	+0.4
2,803,092	-		QEN71_RS12515	0.74	+0.1
2,803,092	-		QEN71_RS12515	0.74	-0.3
2,803,092	-		QEN71_RS12515	0.74	-0.0
2,803,092	-		QEN71_RS12515	0.74	-1.2
2,803,203	+				+0.4
2,803,203	+				+0.5
2,803,203	+				-0.4
2,803,203	+				+1.4
2,803,203	+				-0.1
2,803,204	-				+0.2
2,803,204	-				+0.3
2,803,341	+		QEN71_RS12520	0.30	+0.3
2,803,341	+		QEN71_RS12520	0.30	-1.4
2,803,341	+		QEN71_RS12520	0.30	+1.0
2,803,341	+		QEN71_RS12520	0.30	-2.1
2,803,341	+		QEN71_RS12520	0.30	+0.9
2,803,341	+		QEN71_RS12520	0.30	-0.4
2,803,342	-		QEN71_RS12520	0.30	+0.8
2,803,342	-		QEN71_RS12520	0.30	+0.6
2,803,342	-		QEN71_RS12520	0.30	-0.7
2,803,342	-		QEN71_RS12520	0.30	-0.4
2,803,371	+		QEN71_RS12520	0.37	+0.0
2,803,380	+		QEN71_RS12520	0.39	-1.6
2,803,381	-		QEN71_RS12520	0.39	-2.4
2,803,657	+				-0.9
2,803,657	+				+0.5
2,803,657	+				+0.0
2,803,657	+				+0.8
2,803,657	+				+2.7
2,803,657	+				-0.8
2,803,657	+				+1.1
2,803,657	+				+0.9
2,803,657	+				+0.9
2,803,658	-				+0.9
2,803,658	-				+0.1
2,803,712	+				+1.4
2,803,712	+				-1.8
2,803,780	+				-0.9
2,803,780	+				+1.5
2,803,780	+				-0.3
2,803,780	+				-0.4
2,803,780	+				-0.6
2,803,781	-				+0.3
2,803,781	-				+0.1
2,803,781	-				-0.3
2,803,781	-				-0.1
2,803,830	+				-0.8
2,803,831	-				-0.3
2,803,912	+		QEN71_RS12525	0.40	+1.7
2,803,913	-		QEN71_RS12525	0.40	-0.9
2,803,913	-		QEN71_RS12525	0.40	-0.1
2,803,913	-		QEN71_RS12525	0.40	+0.5
2,803,913	-		QEN71_RS12525	0.40	+0.4
2,804,041	+				-0.4
2,804,042	-				-1.0
2,804,072	-				-0.1
2,804,072	-				-0.6
2,804,122	+				-1.0
2,804,122	+				+0.5
2,804,123	-				-1.4
2,804,123	-				-0.1
2,804,147	+				-0.4
2,804,147	+				-0.4
2,804,147	+				-0.0
2,804,147	+				+0.5
2,804,147	+				-0.0
2,804,147	+				-0.8
2,804,147	+				+0.4
2,804,147	+				-0.4
2,804,148	-				-0.9
2,804,148	-				+0.6
2,804,148	-				-1.1
2,804,148	-				-0.4
2,804,148	-				-1.0
2,804,150	+				+0.3
2,804,150	+				-1.6
2,804,150	+				-0.2
2,804,150	+				+0.7
2,804,150	+				-1.0
2,804,150	+				+0.2
2,804,150	+				+0.2
2,804,150	+				+1.0
2,804,150	+				+0.7
2,804,150	+				+0.6
2,804,150	+				-0.4
2,804,150	+				-0.7
2,804,151	-				-0.1
2,804,151	-				-0.7
2,804,151	-				-0.6
2,804,151	-				+0.8
2,804,151	-				+0.5
2,804,151	-				-1.2
2,804,151	-				+0.1
2,804,193	+				-0.3
2,804,193	+				-0.9
2,804,221	+				+1.1
2,804,222	-				-1.4
2,804,222	-				-0.9