Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS08245 and QEN71_RS08250 are separated by 15 nucleotides QEN71_RS08250 and QEN71_RS08255 overlap by 4 nucleotides QEN71_RS08255 and QEN71_RS08260 are separated by 36 nucleotides
QEN71_RS08245: QEN71_RS08245 - acyl-CoA dehydrogenase family protein, at 1,829,166 to 1,830,365
_RS08245
QEN71_RS08250: QEN71_RS08250 - acyl-CoA dehydrogenase family protein, at 1,830,381 to 1,831,535
_RS08250
QEN71_RS08255: QEN71_RS08255 - MaoC family dehydratase, at 1,831,532 to 1,831,987
_RS08255
QEN71_RS08260: QEN71_RS08260 - SDR family NAD(P)-dependent oxidoreductase, at 1,832,024 to 1,832,923
_RS08260
Position (kb)
1830
1831
1832 Strain fitness (log2 ratio)
-2
-1
0
1 at 1829.616 kb on + strand, within QEN71_RS08245 at 1829.616 kb on + strand, within QEN71_RS08245 at 1829.616 kb on + strand, within QEN71_RS08245 at 1829.616 kb on + strand, within QEN71_RS08245 at 1829.617 kb on - strand, within QEN71_RS08245 at 1829.617 kb on - strand, within QEN71_RS08245 at 1829.617 kb on - strand, within QEN71_RS08245 at 1829.617 kb on - strand, within QEN71_RS08245 at 1829.617 kb on - strand, within QEN71_RS08245 at 1829.649 kb on + strand, within QEN71_RS08245 at 1830.307 kb on - strand at 1830.450 kb on + strand at 1830.595 kb on + strand, within QEN71_RS08250 at 1830.596 kb on - strand, within QEN71_RS08250 at 1830.717 kb on + strand, within QEN71_RS08250 at 1830.717 kb on + strand, within QEN71_RS08250 at 1830.753 kb on + strand, within QEN71_RS08250 at 1830.753 kb on + strand, within QEN71_RS08250 at 1830.754 kb on - strand, within QEN71_RS08250 at 1830.756 kb on - strand, within QEN71_RS08250 at 1831.422 kb on + strand at 1831.426 kb on - strand at 1831.426 kb on - strand at 1831.515 kb on - strand at 1832.029 kb on + strand at 1832.252 kb on + strand, within QEN71_RS08260 at 1832.253 kb on - strand, within QEN71_RS08260 at 1832.493 kb on - strand, within QEN71_RS08260
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,829,616 + QEN71_RS08245 0.38 +0.3 1,829,616 + QEN71_RS08245 0.38 -0.6 1,829,616 + QEN71_RS08245 0.38 +0.3 1,829,616 + QEN71_RS08245 0.38 -0.6 1,829,617 - QEN71_RS08245 0.38 +0.3 1,829,617 - QEN71_RS08245 0.38 +0.6 1,829,617 - QEN71_RS08245 0.38 -0.5 1,829,617 - QEN71_RS08245 0.38 +0.0 1,829,617 - QEN71_RS08245 0.38 +0.1 1,829,649 + QEN71_RS08245 0.40 -1.7 1,830,307 - +0.3 1,830,450 + -1.8 1,830,595 + QEN71_RS08250 0.19 +0.3 1,830,596 - QEN71_RS08250 0.19 -0.2 1,830,717 + QEN71_RS08250 0.29 -2.6 1,830,717 + QEN71_RS08250 0.29 -0.1 1,830,753 + QEN71_RS08250 0.32 +0.2 1,830,753 + QEN71_RS08250 0.32 -0.1 1,830,754 - QEN71_RS08250 0.32 -0.0 1,830,756 - QEN71_RS08250 0.32 -0.5 1,831,422 + -0.4 1,831,426 - +1.1 1,831,426 - -0.2 1,831,515 - -0.4 1,832,029 + -0.4 1,832,252 + QEN71_RS08260 0.25 +0.7 1,832,253 - QEN71_RS08260 0.25 +0.9 1,832,493 - QEN71_RS08260 0.52 +0.4
Or see this region's nucleotide sequence