Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS38365 and QEN71_RS38370 are separated by 2 nucleotides QEN71_RS38370 and QEN71_RS38375 are separated by 103 nucleotides
QEN71_RS38365: QEN71_RS38365 - type II toxin-antitoxin system HipA family toxin, at 1,991,839 to 1,993,188
_RS38365
QEN71_RS38370: QEN71_RS38370 - helix-turn-helix domain-containing protein, at 1,993,191 to 1,993,454
_RS38370
QEN71_RS38375: QEN71_RS38375 - four-carbon acid sugar kinase family protein, at 1,993,558 to 1,994,940
_RS38375
Position (kb) 1993
1994 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1992.265 kb on - strand, within QEN71_RS38365 at 1992.265 kb on - strand, within QEN71_RS38365 at 1992.265 kb on - strand, within QEN71_RS38365 at 1992.365 kb on + strand, within QEN71_RS38365 at 1992.365 kb on + strand, within QEN71_RS38365 at 1992.366 kb on - strand, within QEN71_RS38365 at 1992.366 kb on - strand, within QEN71_RS38365 at 1992.527 kb on + strand, within QEN71_RS38365 at 1992.527 kb on + strand, within QEN71_RS38365 at 1992.527 kb on + strand, within QEN71_RS38365 at 1992.624 kb on + strand, within QEN71_RS38365 at 1992.624 kb on + strand, within QEN71_RS38365 at 1992.624 kb on + strand, within QEN71_RS38365 at 1992.624 kb on + strand, within QEN71_RS38365 at 1992.624 kb on + strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.625 kb on - strand, within QEN71_RS38365 at 1992.810 kb on + strand, within QEN71_RS38365 at 1992.810 kb on + strand, within QEN71_RS38365 at 1992.811 kb on - strand, within QEN71_RS38365 at 1992.811 kb on - strand, within QEN71_RS38365 at 1992.987 kb on - strand, within QEN71_RS38365 at 1992.987 kb on - strand, within QEN71_RS38365 at 1992.987 kb on - strand, within QEN71_RS38365 at 1992.987 kb on - strand, within QEN71_RS38365 at 1992.987 kb on - strand, within QEN71_RS38365 at 1993.088 kb on + strand at 1993.089 kb on - strand at 1993.089 kb on - strand at 1993.170 kb on + strand at 1993.171 kb on - strand at 1993.289 kb on + strand, within QEN71_RS38370 at 1993.289 kb on + strand, within QEN71_RS38370 at 1993.289 kb on + strand, within QEN71_RS38370 at 1993.289 kb on + strand, within QEN71_RS38370 at 1993.289 kb on + strand, within QEN71_RS38370 at 1993.289 kb on + strand, within QEN71_RS38370 at 1993.290 kb on - strand, within QEN71_RS38370 at 1993.322 kb on + strand, within QEN71_RS38370 at 1993.322 kb on + strand, within QEN71_RS38370 at 1993.322 kb on + strand, within QEN71_RS38370 at 1993.461 kb on - strand at 1993.501 kb on + strand at 1993.501 kb on + strand at 1993.512 kb on + strand at 1993.547 kb on + strand at 1994.195 kb on + strand, within QEN71_RS38375 at 1994.195 kb on + strand, within QEN71_RS38375 at 1994.196 kb on - strand, within QEN71_RS38375 at 1994.196 kb on - strand, within QEN71_RS38375 at 1994.196 kb on - strand, within QEN71_RS38375
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 1,992,265 - QEN71_RS38365 0.32 -0.8 1,992,265 - QEN71_RS38365 0.32 -0.4 1,992,265 - QEN71_RS38365 0.32 -0.4 1,992,365 + QEN71_RS38365 0.39 +2.0 1,992,365 + QEN71_RS38365 0.39 -0.6 1,992,366 - QEN71_RS38365 0.39 -0.6 1,992,366 - QEN71_RS38365 0.39 -2.0 1,992,527 + QEN71_RS38365 0.51 +0.5 1,992,527 + QEN71_RS38365 0.51 +0.7 1,992,527 + QEN71_RS38365 0.51 -0.9 1,992,624 + QEN71_RS38365 0.58 -1.0 1,992,624 + QEN71_RS38365 0.58 +0.2 1,992,624 + QEN71_RS38365 0.58 -0.6 1,992,624 + QEN71_RS38365 0.58 +1.0 1,992,624 + QEN71_RS38365 0.58 +1.1 1,992,625 - QEN71_RS38365 0.58 -0.4 1,992,625 - QEN71_RS38365 0.58 -0.5 1,992,625 - QEN71_RS38365 0.58 -0.2 1,992,625 - QEN71_RS38365 0.58 -1.6 1,992,625 - QEN71_RS38365 0.58 -0.2 1,992,625 - QEN71_RS38365 0.58 -1.2 1,992,625 - QEN71_RS38365 0.58 -0.4 1,992,810 + QEN71_RS38365 0.72 +0.4 1,992,810 + QEN71_RS38365 0.72 +0.1 1,992,811 - QEN71_RS38365 0.72 -0.3 1,992,811 - QEN71_RS38365 0.72 +1.6 1,992,987 - QEN71_RS38365 0.85 +0.5 1,992,987 - QEN71_RS38365 0.85 -0.3 1,992,987 - QEN71_RS38365 0.85 +0.3 1,992,987 - QEN71_RS38365 0.85 -1.5 1,992,987 - QEN71_RS38365 0.85 -0.6 1,993,088 + -1.4 1,993,089 - -1.2 1,993,089 - +0.5 1,993,170 + -0.0 1,993,171 - -0.1 1,993,289 + QEN71_RS38370 0.37 -2.4 1,993,289 + QEN71_RS38370 0.37 -2.1 1,993,289 + QEN71_RS38370 0.37 -0.9 1,993,289 + QEN71_RS38370 0.37 -0.9 1,993,289 + QEN71_RS38370 0.37 -0.4 1,993,289 + QEN71_RS38370 0.37 -0.6 1,993,290 - QEN71_RS38370 0.38 -0.4 1,993,322 + QEN71_RS38370 0.50 -2.6 1,993,322 + QEN71_RS38370 0.50 -1.0 1,993,322 + QEN71_RS38370 0.50 -3.1 1,993,461 - +0.5 1,993,501 + -1.4 1,993,501 + -1.3 1,993,512 + +0.9 1,993,547 + -0.0 1,994,195 + QEN71_RS38375 0.46 +0.5 1,994,195 + QEN71_RS38375 0.46 +0.0 1,994,196 - QEN71_RS38375 0.46 +1.2 1,994,196 - QEN71_RS38375 0.46 -0.1 1,994,196 - QEN71_RS38375 0.46 -0.6
Or see this region's nucleotide sequence