Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37725 and QEN71_RS37730 are separated by 117 nucleotides QEN71_RS37730 and QEN71_RS37735 are separated by 78 nucleotides
QEN71_RS37725: QEN71_RS37725 - oxidoreductase, at 1,830,431 to 1,831,288
_RS37725
QEN71_RS37730: QEN71_RS37730 - LysR family transcriptional regulator, at 1,831,406 to 1,832,335
_RS37730
QEN71_RS37735: QEN71_RS37735 - M1 family metallopeptidase, at 1,832,414 to 1,834,585
_RS37735
Position (kb)
1831
1832
1833 Strain fitness (log2 ratio)
-2
-1
0
1 at 1830.667 kb on - strand, within QEN71_RS37725 at 1830.667 kb on - strand, within QEN71_RS37725 at 1830.729 kb on + strand, within QEN71_RS37725 at 1830.729 kb on + strand, within QEN71_RS37725 at 1830.825 kb on + strand, within QEN71_RS37725 at 1830.825 kb on + strand, within QEN71_RS37725 at 1830.826 kb on - strand, within QEN71_RS37725 at 1830.826 kb on - strand, within QEN71_RS37725 at 1830.826 kb on - strand, within QEN71_RS37725 at 1830.826 kb on - strand, within QEN71_RS37725 at 1830.826 kb on - strand, within QEN71_RS37725 at 1830.826 kb on - strand, within QEN71_RS37725 at 1830.957 kb on + strand, within QEN71_RS37725 at 1830.957 kb on + strand, within QEN71_RS37725 at 1830.958 kb on - strand, within QEN71_RS37725 at 1830.958 kb on - strand, within QEN71_RS37725 at 1831.328 kb on + strand at 1831.328 kb on + strand at 1831.328 kb on + strand at 1831.329 kb on - strand at 1831.329 kb on - strand at 1831.352 kb on - strand at 1831.352 kb on - strand at 1831.384 kb on + strand at 1831.384 kb on + strand at 1831.384 kb on + strand at 1831.384 kb on + strand at 1831.385 kb on - strand at 1831.385 kb on - strand at 1831.447 kb on + strand at 1831.447 kb on + strand at 1831.448 kb on - strand at 1831.758 kb on - strand, within QEN71_RS37730 at 1831.917 kb on - strand, within QEN71_RS37730 at 1831.917 kb on - strand, within QEN71_RS37730 at 1831.918 kb on + strand, within QEN71_RS37730 at 1832.043 kb on - strand, within QEN71_RS37730 at 1832.213 kb on + strand, within QEN71_RS37730 at 1832.213 kb on + strand, within QEN71_RS37730 at 1832.213 kb on + strand, within QEN71_RS37730 at 1832.214 kb on - strand, within QEN71_RS37730 at 1832.214 kb on - strand, within QEN71_RS37730 at 1832.219 kb on + strand, within QEN71_RS37730 at 1832.219 kb on + strand, within QEN71_RS37730 at 1832.219 kb on + strand, within QEN71_RS37730 at 1832.220 kb on - strand, within QEN71_RS37730 at 1832.220 kb on - strand, within QEN71_RS37730 at 1832.222 kb on + strand, within QEN71_RS37730 at 1832.303 kb on + strand at 1832.334 kb on - strand at 1832.370 kb on + strand at 1832.370 kb on + strand at 1832.394 kb on + strand at 1832.394 kb on + strand at 1832.688 kb on + strand, within QEN71_RS37735 at 1832.688 kb on + strand, within QEN71_RS37735 at 1832.689 kb on - strand, within QEN71_RS37735 at 1832.689 kb on - strand, within QEN71_RS37735 at 1832.689 kb on - strand, within QEN71_RS37735 at 1832.689 kb on - strand, within QEN71_RS37735 at 1832.691 kb on + strand, within QEN71_RS37735 at 1832.691 kb on + strand, within QEN71_RS37735 at 1832.692 kb on - strand, within QEN71_RS37735 at 1832.726 kb on - strand, within QEN71_RS37735 at 1832.756 kb on - strand, within QEN71_RS37735 at 1833.048 kb on + strand, within QEN71_RS37735 at 1833.048 kb on + strand, within QEN71_RS37735 at 1833.049 kb on - strand, within QEN71_RS37735 at 1833.087 kb on + strand, within QEN71_RS37735 at 1833.087 kb on + strand, within QEN71_RS37735 at 1833.087 kb on + strand, within QEN71_RS37735 at 1833.126 kb on + strand, within QEN71_RS37735 at 1833.126 kb on + strand, within QEN71_RS37735 at 1833.127 kb on - strand, within QEN71_RS37735 at 1833.231 kb on + strand, within QEN71_RS37735 at 1833.231 kb on + strand, within QEN71_RS37735 at 1833.232 kb on - strand, within QEN71_RS37735 at 1833.303 kb on + strand, within QEN71_RS37735 at 1833.304 kb on - strand, within QEN71_RS37735 at 1833.304 kb on - strand, within QEN71_RS37735 at 1833.304 kb on - strand, within QEN71_RS37735
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 1,830,667 - QEN71_RS37725 0.28 -1.1 1,830,667 - QEN71_RS37725 0.28 -0.1 1,830,729 + QEN71_RS37725 0.35 +0.5 1,830,729 + QEN71_RS37725 0.35 -0.8 1,830,825 + QEN71_RS37725 0.46 -0.1 1,830,825 + QEN71_RS37725 0.46 +0.1 1,830,826 - QEN71_RS37725 0.46 +0.4 1,830,826 - QEN71_RS37725 0.46 -0.1 1,830,826 - QEN71_RS37725 0.46 -0.4 1,830,826 - QEN71_RS37725 0.46 +0.1 1,830,826 - QEN71_RS37725 0.46 -0.6 1,830,826 - QEN71_RS37725 0.46 +0.0 1,830,957 + QEN71_RS37725 0.61 -0.5 1,830,957 + QEN71_RS37725 0.61 -0.1 1,830,958 - QEN71_RS37725 0.61 -0.6 1,830,958 - QEN71_RS37725 0.61 -0.5 1,831,328 + -0.8 1,831,328 + -0.4 1,831,328 + -0.1 1,831,329 - -0.5 1,831,329 - -0.5 1,831,352 - -1.2 1,831,352 - -0.7 1,831,384 + -0.6 1,831,384 + -0.2 1,831,384 + +0.2 1,831,384 + -1.6 1,831,385 - -0.9 1,831,385 - -1.1 1,831,447 + +0.5 1,831,447 + +0.9 1,831,448 - -0.6 1,831,758 - QEN71_RS37730 0.38 +0.5 1,831,917 - QEN71_RS37730 0.55 +0.7 1,831,917 - QEN71_RS37730 0.55 -1.8 1,831,918 + QEN71_RS37730 0.55 -0.1 1,832,043 - QEN71_RS37730 0.68 -0.8 1,832,213 + QEN71_RS37730 0.87 +0.1 1,832,213 + QEN71_RS37730 0.87 +1.6 1,832,213 + QEN71_RS37730 0.87 -0.2 1,832,214 - QEN71_RS37730 0.87 -0.5 1,832,214 - QEN71_RS37730 0.87 -0.9 1,832,219 + QEN71_RS37730 0.87 -1.5 1,832,219 + QEN71_RS37730 0.87 +0.3 1,832,219 + QEN71_RS37730 0.87 +0.2 1,832,220 - QEN71_RS37730 0.88 +0.1 1,832,220 - QEN71_RS37730 0.88 -0.4 1,832,222 + QEN71_RS37730 0.88 +0.3 1,832,303 + +0.3 1,832,334 - +0.3 1,832,370 + -0.7 1,832,370 + -0.6 1,832,394 + -0.7 1,832,394 + -1.2 1,832,688 + QEN71_RS37735 0.13 -0.2 1,832,688 + QEN71_RS37735 0.13 -2.2 1,832,689 - QEN71_RS37735 0.13 +0.1 1,832,689 - QEN71_RS37735 0.13 -1.4 1,832,689 - QEN71_RS37735 0.13 -0.0 1,832,689 - QEN71_RS37735 0.13 -0.0 1,832,691 + QEN71_RS37735 0.13 +0.2 1,832,691 + QEN71_RS37735 0.13 -0.9 1,832,692 - QEN71_RS37735 0.13 -0.5 1,832,726 - QEN71_RS37735 0.14 -2.0 1,832,756 - QEN71_RS37735 0.16 -1.1 1,833,048 + QEN71_RS37735 0.29 -1.2 1,833,048 + QEN71_RS37735 0.29 -0.1 1,833,049 - QEN71_RS37735 0.29 -0.9 1,833,087 + QEN71_RS37735 0.31 +0.1 1,833,087 + QEN71_RS37735 0.31 -1.0 1,833,087 + QEN71_RS37735 0.31 +0.8 1,833,126 + QEN71_RS37735 0.33 +0.1 1,833,126 + QEN71_RS37735 0.33 -0.9 1,833,127 - QEN71_RS37735 0.33 -0.1 1,833,231 + QEN71_RS37735 0.38 +0.7 1,833,231 + QEN71_RS37735 0.38 -0.1 1,833,232 - QEN71_RS37735 0.38 +0.1 1,833,303 + QEN71_RS37735 0.41 +1.1 1,833,304 - QEN71_RS37735 0.41 -0.5 1,833,304 - QEN71_RS37735 0.41 +0.4 1,833,304 - QEN71_RS37735 0.41 -1.7
Or see this region's nucleotide sequence