Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21380 and QEN71_RS21385 are separated by 868 nucleotides QEN71_RS21385 and QEN71_RS21390 are separated by 6 nucleotides
QEN71_RS21380: QEN71_RS21380 - metallopeptidase TldD-related protein, at 4,736,215 to 4,737,552
_RS21380
QEN71_RS21385: QEN71_RS21385 - poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA, at 4,738,421 to 4,740,466
_RS21385
QEN71_RS21390: QEN71_RS21390 - poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, at 4,740,473 to 4,742,515
_RS21390
Position (kb) 4738
4739
4740
4741 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4737.549 kb on - strand at 4737.923 kb on - strand at 4738.165 kb on - strand at 4738.244 kb on + strand at 4738.349 kb on - strand at 4738.439 kb on - strand at 4738.931 kb on + strand, within QEN71_RS21385 at 4738.931 kb on + strand, within QEN71_RS21385 at 4738.976 kb on + strand, within QEN71_RS21385 at 4738.997 kb on + strand, within QEN71_RS21385 at 4738.998 kb on - strand, within QEN71_RS21385 at 4738.998 kb on - strand, within QEN71_RS21385 at 4739.003 kb on + strand, within QEN71_RS21385 at 4739.003 kb on + strand, within QEN71_RS21385 at 4739.003 kb on + strand, within QEN71_RS21385 at 4739.004 kb on - strand, within QEN71_RS21385 at 4739.153 kb on + strand, within QEN71_RS21385 at 4739.276 kb on + strand, within QEN71_RS21385 at 4739.285 kb on + strand, within QEN71_RS21385 at 4739.582 kb on + strand, within QEN71_RS21385 at 4739.591 kb on + strand, within QEN71_RS21385 at 4739.591 kb on + strand, within QEN71_RS21385 at 4739.592 kb on - strand, within QEN71_RS21385 at 4739.592 kb on - strand, within QEN71_RS21385 at 4739.702 kb on + strand, within QEN71_RS21385 at 4739.882 kb on + strand, within QEN71_RS21385 at 4739.883 kb on - strand, within QEN71_RS21385 at 4739.883 kb on - strand, within QEN71_RS21385 at 4740.036 kb on - strand, within QEN71_RS21385 at 4740.179 kb on + strand, within QEN71_RS21385 at 4740.440 kb on + strand at 4740.440 kb on + strand at 4740.441 kb on - strand at 4740.490 kb on + strand at 4740.815 kb on + strand, within QEN71_RS21390 at 4740.815 kb on + strand, within QEN71_RS21390 at 4740.815 kb on + strand, within QEN71_RS21390 at 4740.816 kb on - strand, within QEN71_RS21390 at 4740.957 kb on - strand, within QEN71_RS21390 at 4741.094 kb on + strand, within QEN71_RS21390 at 4741.115 kb on + strand, within QEN71_RS21390 at 4741.174 kb on + strand, within QEN71_RS21390 at 4741.232 kb on + strand, within QEN71_RS21390 at 4741.232 kb on + strand, within QEN71_RS21390 at 4741.233 kb on - strand, within QEN71_RS21390 at 4741.233 kb on - strand, within QEN71_RS21390 at 4741.233 kb on - strand, within QEN71_RS21390 at 4741.234 kb on + strand, within QEN71_RS21390 at 4741.235 kb on - strand, within QEN71_RS21390
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 4,737,549 - +0.3 4,737,923 - +1.3 4,738,165 - -0.1 4,738,244 + -1.6 4,738,349 - +0.5 4,738,439 - -1.2 4,738,931 + QEN71_RS21385 0.25 -0.7 4,738,931 + QEN71_RS21385 0.25 -0.2 4,738,976 + QEN71_RS21385 0.27 -0.6 4,738,997 + QEN71_RS21385 0.28 -0.6 4,738,998 - QEN71_RS21385 0.28 -0.5 4,738,998 - QEN71_RS21385 0.28 +1.3 4,739,003 + QEN71_RS21385 0.28 -2.3 4,739,003 + QEN71_RS21385 0.28 +1.1 4,739,003 + QEN71_RS21385 0.28 -1.2 4,739,004 - QEN71_RS21385 0.28 -0.5 4,739,153 + QEN71_RS21385 0.36 -0.7 4,739,276 + QEN71_RS21385 0.42 -0.5 4,739,285 + QEN71_RS21385 0.42 -1.4 4,739,582 + QEN71_RS21385 0.57 -1.2 4,739,591 + QEN71_RS21385 0.57 -0.5 4,739,591 + QEN71_RS21385 0.57 -0.2 4,739,592 - QEN71_RS21385 0.57 -1.9 4,739,592 - QEN71_RS21385 0.57 +0.5 4,739,702 + QEN71_RS21385 0.63 -1.6 4,739,882 + QEN71_RS21385 0.71 -0.9 4,739,883 - QEN71_RS21385 0.71 -0.3 4,739,883 - QEN71_RS21385 0.71 -0.5 4,740,036 - QEN71_RS21385 0.79 +1.0 4,740,179 + QEN71_RS21385 0.86 -0.0 4,740,440 + -1.2 4,740,440 + +0.5 4,740,441 - -0.9 4,740,490 + -0.2 4,740,815 + QEN71_RS21390 0.17 +0.1 4,740,815 + QEN71_RS21390 0.17 +0.1 4,740,815 + QEN71_RS21390 0.17 -1.6 4,740,816 - QEN71_RS21390 0.17 +0.6 4,740,957 - QEN71_RS21390 0.24 +2.4 4,741,094 + QEN71_RS21390 0.30 +0.2 4,741,115 + QEN71_RS21390 0.31 +1.3 4,741,174 + QEN71_RS21390 0.34 -0.4 4,741,232 + QEN71_RS21390 0.37 +0.0 4,741,232 + QEN71_RS21390 0.37 -0.4 4,741,233 - QEN71_RS21390 0.37 +0.1 4,741,233 - QEN71_RS21390 0.37 -0.8 4,741,233 - QEN71_RS21390 0.37 +1.4 4,741,234 + QEN71_RS21390 0.37 -1.2 4,741,235 - QEN71_RS21390 0.37 -0.2
Or see this region's nucleotide sequence