Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS17775

Experiment: D-Sorbitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Sorbitol (C)
3,962,792	+		QEN71_RS17765	0.76	-1.2
3,962,792	+		QEN71_RS17765	0.76	-1.7
3,962,792	+		QEN71_RS17765	0.76	-0.5
3,962,792	+		QEN71_RS17765	0.76	+0.7
3,962,792	+		QEN71_RS17765	0.76	-0.2
3,962,793	-		QEN71_RS17765	0.76	-0.0
3,962,793	-		QEN71_RS17765	0.76	+0.9
3,962,793	-		QEN71_RS17765	0.76	+0.2
3,962,793	-		QEN71_RS17765	0.76	+0.2
3,962,969	+				-0.4
3,962,970	-				-1.2
3,963,047	+				-0.1
3,963,047	+				+0.1
3,963,047	+				-0.1
3,963,048	-				-0.8
3,963,048	-				-0.2
3,963,048	-				+0.3
3,963,048	-				-0.7
3,963,048	-				+0.5
3,963,048	-				+0.0
3,963,048	-				+0.3
3,963,048	-				+0.1
3,963,048	-				-0.4
3,963,056	+				+0.3
3,963,056	+				-0.6
3,963,056	+				+0.6
3,963,057	-				+1.3
3,963,057	-				+1.1
3,963,138	-		QEN71_RS17770	0.21	-1.2
3,963,197	+		QEN71_RS17770	0.29	-0.1
3,963,197	+		QEN71_RS17770	0.29	+0.5
3,963,197	+		QEN71_RS17770	0.29	+0.6
3,963,198	-		QEN71_RS17770	0.29	+2.1
3,963,278	+		QEN71_RS17770	0.41	+0.2
3,963,278	+		QEN71_RS17770	0.41	+0.4
3,963,279	-		QEN71_RS17770	0.41	+0.3
3,963,341	+		QEN71_RS17770	0.50	-0.9
3,963,342	-		QEN71_RS17770	0.50	+0.4
3,963,383	+		QEN71_RS17770	0.56	+0.1
3,963,383	+		QEN71_RS17770	0.56	-1.0
3,963,383	+		QEN71_RS17770	0.56	-0.0
3,963,383	+		QEN71_RS17770	0.56	-0.3
3,963,383	+		QEN71_RS17770	0.56	+1.0
3,963,384	-		QEN71_RS17770	0.56	-0.6
3,963,384	-		QEN71_RS17770	0.56	-1.1
3,963,384	-		QEN71_RS17770	0.56	-0.5
3,963,384	-		QEN71_RS17770	0.56	+0.9
3,963,384	-		QEN71_RS17770	0.56	-0.2
3,963,395	+		QEN71_RS17770	0.57	+0.8
3,963,395	+		QEN71_RS17770	0.57	-0.5
3,963,395	+		QEN71_RS17770	0.57	-0.2
3,963,395	+		QEN71_RS17770	0.57	-1.1
3,963,395	+		QEN71_RS17770	0.57	-1.0
3,963,395	+		QEN71_RS17770	0.57	-0.7
3,963,395	+		QEN71_RS17770	0.57	-0.4
3,963,395	+		QEN71_RS17770	0.57	+0.0
3,963,395	+		QEN71_RS17770	0.57	-0.4
3,963,395	+		QEN71_RS17770	0.57	-0.0
3,963,395	+		QEN71_RS17770	0.57	+0.7
3,963,396	-		QEN71_RS17770	0.58	+0.5
3,963,396	-		QEN71_RS17770	0.58	+0.5
3,963,396	-		QEN71_RS17770	0.58	+0.5
3,963,396	-		QEN71_RS17770	0.58	+0.7
3,963,396	-		QEN71_RS17770	0.58	-0.5
3,963,396	-		QEN71_RS17770	0.58	-1.1
3,963,396	-		QEN71_RS17770	0.58	+1.2
3,963,396	-		QEN71_RS17770	0.58	-0.4
3,963,461	+		QEN71_RS17770	0.67	+0.1
3,963,461	+		QEN71_RS17770	0.67	-0.4
3,963,519	+		QEN71_RS17770	0.75	-0.7
3,963,554	+		QEN71_RS17770	0.80	-1.0
3,963,554	+		QEN71_RS17770	0.80	-0.3
3,963,554	+		QEN71_RS17770	0.80	+0.8
3,963,721	+				-2.3
3,963,721	+				-0.2
3,963,721	+				-0.4
3,963,722	-				+0.7
3,963,722	-				-1.4
3,963,722	-				-0.0
3,963,722	-				-1.3
3,963,824	+		QEN71_RS17775	0.31	-0.4
3,963,824	+		QEN71_RS17775	0.31	-1.5
3,963,824	+		QEN71_RS17775	0.31	+0.2
3,963,825	-		QEN71_RS17775	0.31	-0.2
3,963,825	-		QEN71_RS17775	0.31	+0.7
3,963,825	-		QEN71_RS17775	0.31	-0.0
3,963,825	-		QEN71_RS17775	0.31	-0.5
3,963,866	+		QEN71_RS17775	0.40	+0.7
3,963,867	-		QEN71_RS17775	0.40	-1.1
3,963,867	-		QEN71_RS17775	0.40	-0.8
3,963,867	-		QEN71_RS17775	0.40	+0.4
3,963,867	-		QEN71_RS17775	0.40	+1.7
3,963,867	-		QEN71_RS17775	0.40	-0.0
3,963,867	-		QEN71_RS17775	0.40	+0.1
3,963,868	+		QEN71_RS17775	0.41	+0.2
3,963,868	+		QEN71_RS17775	0.41	-1.0
3,963,868	+		QEN71_RS17775	0.41	-1.8
3,963,868	+		QEN71_RS17775	0.41	-0.6
3,963,868	+		QEN71_RS17775	0.41	-1.1
3,963,868	+		QEN71_RS17775	0.41	-1.6
3,963,868	+		QEN71_RS17775	0.41	-0.7
3,963,868	+		QEN71_RS17775	0.41	+0.9
3,963,868	+		QEN71_RS17775	0.41	-0.0
3,963,868	+		QEN71_RS17775	0.41	-1.3
3,963,868	+		QEN71_RS17775	0.41	+0.1
3,963,868	+		QEN71_RS17775	0.41	+0.3
3,963,868	+		QEN71_RS17775	0.41	-0.0
3,963,868	+		QEN71_RS17775	0.41	-2.3
3,963,868	+		QEN71_RS17775	0.41	-1.0
3,963,868	+		QEN71_RS17775	0.41	-1.0
3,963,868	+		QEN71_RS17775	0.41	-0.5
3,963,868	+		QEN71_RS17775	0.41	-0.6
3,963,869	-		QEN71_RS17775	0.41	+0.3
3,963,869	-		QEN71_RS17775	0.41	-0.2
3,963,869	-		QEN71_RS17775	0.41	-0.3
3,963,869	-		QEN71_RS17775	0.41	-0.4
3,963,869	-		QEN71_RS17775	0.41	-1.7
3,963,869	-		QEN71_RS17775	0.41	-0.2
3,963,869	-		QEN71_RS17775	0.41	+0.1
3,963,869	-		QEN71_RS17775	0.41	-0.2
3,963,869	-		QEN71_RS17775	0.41	+0.8
3,963,869	-		QEN71_RS17775	0.41	-0.3
3,963,869	-		QEN71_RS17775	0.41	+1.5
3,963,869	-		QEN71_RS17775	0.41	-1.5
3,963,869	-		QEN71_RS17775	0.41	-0.3
3,963,869	-		QEN71_RS17775	0.41	+1.2
3,963,869	-		QEN71_RS17775	0.41	+0.3
3,963,869	-		QEN71_RS17775	0.41	-1.3
3,964,108	+				-0.5
3,964,108	+				+1.7
3,964,108	+				+1.1
3,964,108	+				+0.0
3,964,109	-				+1.3
3,964,109	-				+0.8
3,964,109	-				-0.5
3,964,109	-				+0.5
3,964,163	-				+0.8
3,964,187	+				-0.2
3,964,187	+				-0.2
3,964,187	+				-0.5
3,964,187	+				-0.7
3,964,187	+				+1.1
3,964,188	-				+0.3
3,964,188	-				+1.4
3,964,188	-				-0.5
3,964,188	-				+0.5
3,964,188	-				-0.7
3,964,188	-				-0.4
3,964,188	-				-0.5
3,964,188	-				-0.2
3,964,195	+				-0.5
3,964,195	+				-0.3
3,964,195	+				+0.2
3,964,196	-				-0.5
3,964,196	-				+0.3
3,964,196	-				+0.2
3,964,196	-				-0.2
3,964,196	-				+0.1
3,964,196	-				+0.2
3,964,196	-				-0.4
3,964,196	-				+1.5
3,964,197	+				-0.5
3,964,198	-				+0.0
3,964,198	-				+0.8
3,964,198	-				-0.9
3,964,198	-				+0.4
3,964,263	+				-0.5
3,964,263	+				-1.5
3,964,264	-				+0.2
3,964,264	-				-1.3
3,964,301	+		QEN71_RS17780	0.18	+0.1
3,964,301	+		QEN71_RS17780	0.18	-1.5
3,964,301	+		QEN71_RS17780	0.18	-0.5
3,964,301	+		QEN71_RS17780	0.18	-0.5
3,964,301	+		QEN71_RS17780	0.18	+0.0
3,964,301	+		QEN71_RS17780	0.18	-1.3
3,964,301	+		QEN71_RS17780	0.18	-2.1
3,964,302	-		QEN71_RS17780	0.18	-0.4
3,964,616	+				+0.5
3,964,617	-				-0.8
3,964,617	-				+2.1
3,964,617	-				-0.3
3,965,034	+		QEN71_RS17785	0.46	-1.8
3,965,035	-		QEN71_RS17785	0.47	+0.1
3,965,035	-		QEN71_RS17785	0.47	+0.7
3,965,035	-		QEN71_RS17785	0.47	+0.1
3,965,051	-		QEN71_RS17785	0.48	+0.2