Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS05675

Experiment: D-Sorbitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Sorbitol (C)
1,253,869	+		QEN71_RS05670	0.33	-0.4
1,253,869	+		QEN71_RS05670	0.33	+0.1
1,253,869	+		QEN71_RS05670	0.33	-0.6
1,253,869	+		QEN71_RS05670	0.33	+0.8
1,253,869	+		QEN71_RS05670	0.33	-0.4
1,253,869	+		QEN71_RS05670	0.33	-1.1
1,253,869	+		QEN71_RS05670	0.33	+0.9
1,253,869	+		QEN71_RS05670	0.33	+0.3
1,253,869	+		QEN71_RS05670	0.33	+0.4
1,253,869	+		QEN71_RS05670	0.33	-0.2
1,253,869	+		QEN71_RS05670	0.33	+0.3
1,253,870	-		QEN71_RS05670	0.33	+1.5
1,253,870	-		QEN71_RS05670	0.33	-0.9
1,253,870	-		QEN71_RS05670	0.33	+0.7
1,253,870	-		QEN71_RS05670	0.33	+0.4
1,253,870	-		QEN71_RS05670	0.33	-0.8
1,253,870	-		QEN71_RS05670	0.33	+0.3
1,253,870	-		QEN71_RS05670	0.33	-0.9
1,254,070	+		QEN71_RS05670	0.50	-0.1
1,254,070	+		QEN71_RS05670	0.50	-1.3
1,254,070	+		QEN71_RS05670	0.50	+0.1
1,254,150	+		QEN71_RS05670	0.57	-2.3
1,254,151	-		QEN71_RS05670	0.57	+0.9
1,254,168	+		QEN71_RS05670	0.59	-0.6
1,254,169	-		QEN71_RS05670	0.59	+1.0
1,254,169	-		QEN71_RS05670	0.59	-1.2
1,254,244	+		QEN71_RS05670	0.66	+0.7
1,254,244	+		QEN71_RS05670	0.66	-1.0
1,254,244	+		QEN71_RS05670	0.66	-0.3
1,254,244	+		QEN71_RS05670	0.66	+0.6
1,254,245	-		QEN71_RS05670	0.66	+1.6
1,254,438	+		QEN71_RS05670	0.83	-0.8
1,254,439	-		QEN71_RS05670	0.83	+0.3
1,254,491	-		QEN71_RS05670	0.87	-0.1
1,254,491	-		QEN71_RS05670	0.87	-1.3
1,254,491	-		QEN71_RS05670	0.87	+0.3
1,254,491	-		QEN71_RS05670	0.87	+0.2
1,254,491	-		QEN71_RS05670	0.87	+1.5
1,254,501	-		QEN71_RS05670	0.88	-0.6
1,254,649	-				+0.3
1,254,649	-				-0.6
1,254,649	-				+2.1
1,254,649	-				-1.0
1,254,649	-				+0.4
1,254,685	+				-1.1
1,254,685	+				-0.2
1,254,685	+				-0.2
1,254,685	+				-0.4
1,254,685	+				-1.0
1,254,685	+				-0.9
1,254,685	+				-1.0
1,254,685	+				-0.6
1,254,685	+				-2.4
1,254,685	+				-1.4
1,254,685	+				+1.8
1,254,685	+				-0.6
1,254,686	-				+0.6
1,254,686	-				-1.0
1,254,686	-				+0.1
1,254,686	-				-0.2
1,254,705	+				-0.7
1,254,705	+				-0.1
1,254,705	+				+0.5
1,254,705	+				-0.4
1,254,705	+				-0.3
1,254,705	+				-1.7
1,254,705	+				+1.1
1,254,705	+				+0.3
1,254,705	+				-0.5
1,254,705	+				-0.6
1,254,705	+				+1.3
1,254,705	+				-1.4
1,254,705	+				-2.6
1,254,706	-				-0.7
1,254,706	-				+1.3
1,254,706	-				+0.7
1,254,706	-				-0.5
1,254,706	-				+2.2
1,254,706	-				-0.8
1,254,706	-				-1.1
1,254,706	-				+0.2
1,254,706	-				+0.4
1,254,706	-				-0.2
1,254,706	-				+0.6
1,254,706	-				+0.8
1,254,706	-				-0.6
1,254,706	-				+0.0
1,254,706	-				-0.9
1,254,706	-				+1.2
1,254,706	-				+0.1
1,254,706	-				-0.2
1,254,706	-				+1.0
1,254,706	-				+0.4
1,254,706	-				+0.5
1,254,706	-				-1.1
1,254,706	-				-0.3
1,254,706	-				-0.1
1,254,706	-				-0.9
1,254,707	+				-0.9
1,254,707	+				+0.7
1,254,707	+				-0.4
1,254,707	+				+0.8
1,254,708	-				-1.1
1,254,708	-				-2.4
1,254,708	-				-1.3
1,254,708	-				-0.1
1,254,708	-				-0.5
1,254,708	-				-1.9
1,254,708	-				-0.7
1,254,724	+				-0.9
1,254,725	-				+1.3
1,254,725	-				-2.8
1,254,727	+				+1.2
1,254,727	+				+0.1
1,254,728	-				-0.7
1,254,808	+				-0.5
1,254,808	+				-1.7
1,254,808	+				-1.3
1,255,003	-		QEN71_RS05675	0.19	-0.5
1,255,003	-		QEN71_RS05675	0.19	-1.1
1,255,250	+		QEN71_RS05675	0.36	-0.1
1,255,251	-		QEN71_RS05675	0.36	+0.6
1,255,251	-		QEN71_RS05675	0.36	+0.1
1,255,251	-		QEN71_RS05675	0.36	-0.3
1,255,427	+		QEN71_RS05675	0.47	+0.6
1,255,427	+		QEN71_RS05675	0.47	-0.9
1,255,428	-		QEN71_RS05675	0.48	-0.0
1,255,482	+		QEN71_RS05675	0.51	-0.4
1,255,482	+		QEN71_RS05675	0.51	+1.0
1,255,482	+		QEN71_RS05675	0.51	-2.0
1,255,483	-		QEN71_RS05675	0.51	-0.9
1,255,483	-		QEN71_RS05675	0.51	-0.2
1,255,499	+		QEN71_RS05675	0.52	-1.4
1,255,499	+		QEN71_RS05675	0.52	-0.6
1,255,499	+		QEN71_RS05675	0.52	-0.4
1,255,499	+		QEN71_RS05675	0.52	-0.9
1,255,499	+		QEN71_RS05675	0.52	-0.3
1,255,500	-		QEN71_RS05675	0.52	+0.7
1,255,500	-		QEN71_RS05675	0.52	+0.7
1,255,500	-		QEN71_RS05675	0.52	-0.4
1,255,500	-		QEN71_RS05675	0.52	+2.5
1,255,590	+		QEN71_RS05675	0.58	-0.7
1,255,590	+		QEN71_RS05675	0.58	-0.2
1,255,590	+		QEN71_RS05675	0.58	-1.0
1,255,590	+		QEN71_RS05675	0.58	-0.6
1,255,590	+		QEN71_RS05675	0.58	+0.3
1,255,590	+		QEN71_RS05675	0.58	-0.4
1,255,737	+		QEN71_RS05675	0.68	-0.0
1,255,737	+		QEN71_RS05675	0.68	-0.2
1,255,737	+		QEN71_RS05675	0.68	-0.0
1,255,737	+		QEN71_RS05675	0.68	+0.3
1,255,738	-		QEN71_RS05675	0.68	-0.9
1,255,738	-		QEN71_RS05675	0.68	-0.9
1,255,738	-		QEN71_RS05675	0.68	-0.0
1,255,738	-		QEN71_RS05675	0.68	-0.3
1,255,738	-		QEN71_RS05675	0.68	-1.6
1,255,738	-		QEN71_RS05675	0.68	+0.3
1,255,738	-		QEN71_RS05675	0.68	-0.0
1,256,181	-				-2.4
1,256,187	-				-0.1
1,256,220	+				+0.1
1,256,220	+				-1.8
1,256,220	+				-0.0
1,256,221	-				-0.7
1,256,221	-				+0.7
1,256,295	+				+0.3
1,256,295	+				+0.1
1,256,296	-				-0.9
1,256,296	-				-0.1
1,256,296	-				-0.0
1,256,298	+				-0.5
1,256,298	+				+1.1
1,256,299	-				-1.1
1,256,308	+				-0.8
1,256,308	+				-0.7
1,256,308	+				-0.3
1,256,309	-				-0.9
1,256,309	-				-0.9
1,256,635	+		QEN71_RS05680	0.42	-1.2
1,256,635	+		QEN71_RS05680	0.42	+0.3
1,256,636	-		QEN71_RS05680	0.42	-0.2
1,256,719	+		QEN71_RS05680	0.53	+0.3
1,256,719	+		QEN71_RS05680	0.53	-1.9
1,256,719	+		QEN71_RS05680	0.53	+1.6
1,256,720	-		QEN71_RS05680	0.53	-0.9
1,256,720	-		QEN71_RS05680	0.53	-1.3
1,256,761	+		QEN71_RS05680	0.58	+0.9
1,256,762	-		QEN71_RS05680	0.59	-1.1
1,256,762	-		QEN71_RS05680	0.59	+0.1
1,256,835	-		QEN71_RS05680	0.68	-0.1
1,256,899	+		QEN71_RS05680	0.76	-0.8
1,256,899	+		QEN71_RS05680	0.76	-0.9
1,256,899	+		QEN71_RS05680	0.76	-1.2
1,256,899	+		QEN71_RS05680	0.76	+0.6
1,256,899	+		QEN71_RS05680	0.76	+1.0
1,256,900	-		QEN71_RS05680	0.76	-0.4
1,256,900	-		QEN71_RS05680	0.76	-2.7
1,257,011	+				-0.4
1,257,011	+				-0.4
1,257,011	+				+0.8
1,257,075	+				+0.6
1,257,123	+				-1.6
1,257,124	-				-0.6
1,257,124	-				+1.0
1,257,163	+				-1.3
1,257,163	+				-0.1
1,257,209	+				+0.9
1,257,210	-				-1.7
1,257,210	-				+0.2
1,257,210	-				+0.4
1,257,210	-				-1.6
1,257,210	-				+0.2
1,257,210	-				+0.3
1,257,210	-				-0.4
1,257,210	-				-2.1
1,257,210	-				-1.1
1,257,210	-				+0.9
1,257,210	-				-0.3
1,257,210	-				-0.8
1,257,210	-				-1.4
1,257,210	-				-0.7
1,257,210	-				+0.1
1,257,212	-				-0.4
1,257,212	-				-0.7
1,257,212	-				-0.7
1,257,212	-				+0.7
1,257,212	-				-0.2