Experiment: Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31890 and QEN71_RS31895 are separated by 78 nucleotides QEN71_RS31895 and QEN71_RS31900 are separated by 67 nucleotides
QEN71_RS31890: QEN71_RS31890 - FAD-binding oxidoreductase, at 506,548 to 507,822
_RS31890
QEN71_RS31895: QEN71_RS31895 - ABC transporter substrate-binding protein, at 507,901 to 509,523
_RS31895
QEN71_RS31900: QEN71_RS31900 - ABC transporter permease, at 509,591 to 510,547
_RS31900
Position (kb) 507
508
509
510 Strain fitness (log2 ratio) -2
-1
0
1 at 507.022 kb on - strand, within QEN71_RS31890 at 507.091 kb on - strand, within QEN71_RS31890 at 507.403 kb on + strand, within QEN71_RS31890 at 507.554 kb on - strand, within QEN71_RS31890 at 507.554 kb on - strand, within QEN71_RS31890 at 507.623 kb on - strand, within QEN71_RS31890 at 507.692 kb on + strand, within QEN71_RS31890 at 507.693 kb on - strand, within QEN71_RS31890 at 507.793 kb on + strand at 507.793 kb on + strand at 507.794 kb on - strand at 507.833 kb on - strand at 507.833 kb on - strand at 507.833 kb on - strand at 507.844 kb on - strand at 508.174 kb on + strand, within QEN71_RS31895 at 508.195 kb on + strand, within QEN71_RS31895 at 508.196 kb on - strand, within QEN71_RS31895 at 508.801 kb on + strand, within QEN71_RS31895 at 508.802 kb on - strand, within QEN71_RS31895 at 508.960 kb on + strand, within QEN71_RS31895 at 508.961 kb on - strand, within QEN71_RS31895 at 508.961 kb on - strand, within QEN71_RS31895 at 508.961 kb on - strand, within QEN71_RS31895 at 509.057 kb on - strand, within QEN71_RS31895 at 509.057 kb on - strand, within QEN71_RS31895 at 509.057 kb on - strand, within QEN71_RS31895 at 509.359 kb on + strand, within QEN71_RS31895 at 509.688 kb on + strand, within QEN71_RS31900 at 509.689 kb on - strand, within QEN71_RS31900 at 509.795 kb on + strand, within QEN71_RS31900 at 509.796 kb on - strand, within QEN71_RS31900 at 510.143 kb on + strand, within QEN71_RS31900 at 510.144 kb on - strand, within QEN71_RS31900 at 510.144 kb on - strand, within QEN71_RS31900 at 510.236 kb on + strand, within QEN71_RS31900 at 510.236 kb on + strand, within QEN71_RS31900 at 510.236 kb on + strand, within QEN71_RS31900 at 510.237 kb on - strand, within QEN71_RS31900 at 510.237 kb on - strand, within QEN71_RS31900 at 510.305 kb on - strand, within QEN71_RS31900 at 510.347 kb on + strand, within QEN71_RS31900 at 510.348 kb on - strand, within QEN71_RS31900 at 510.390 kb on - strand, within QEN71_RS31900 at 510.480 kb on - strand at 510.480 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days remove 507,022 - QEN71_RS31890 0.37 -0.0 507,091 - QEN71_RS31890 0.43 +0.4 507,403 + QEN71_RS31890 0.67 -1.0 507,554 - QEN71_RS31890 0.79 +0.2 507,554 - QEN71_RS31890 0.79 -0.5 507,623 - QEN71_RS31890 0.84 -1.1 507,692 + QEN71_RS31890 0.90 -0.5 507,693 - QEN71_RS31890 0.90 +0.3 507,793 + -0.3 507,793 + -2.5 507,794 - -1.1 507,833 - -1.5 507,833 - -1.3 507,833 - -0.3 507,844 - -0.2 508,174 + QEN71_RS31895 0.17 +0.1 508,195 + QEN71_RS31895 0.18 -0.1 508,196 - QEN71_RS31895 0.18 -0.6 508,801 + QEN71_RS31895 0.55 +0.2 508,802 - QEN71_RS31895 0.56 -0.5 508,960 + QEN71_RS31895 0.65 -0.6 508,961 - QEN71_RS31895 0.65 -0.7 508,961 - QEN71_RS31895 0.65 -0.2 508,961 - QEN71_RS31895 0.65 -0.5 509,057 - QEN71_RS31895 0.71 +0.2 509,057 - QEN71_RS31895 0.71 -0.9 509,057 - QEN71_RS31895 0.71 -0.0 509,359 + QEN71_RS31895 0.90 +0.1 509,688 + QEN71_RS31900 0.10 -0.3 509,689 - QEN71_RS31900 0.10 -1.3 509,795 + QEN71_RS31900 0.21 -0.4 509,796 - QEN71_RS31900 0.21 +0.3 510,143 + QEN71_RS31900 0.58 -0.3 510,144 - QEN71_RS31900 0.58 -0.6 510,144 - QEN71_RS31900 0.58 +0.5 510,236 + QEN71_RS31900 0.67 -0.5 510,236 + QEN71_RS31900 0.67 +1.0 510,236 + QEN71_RS31900 0.67 -0.9 510,237 - QEN71_RS31900 0.68 -0.6 510,237 - QEN71_RS31900 0.68 -2.4 510,305 - QEN71_RS31900 0.75 +0.6 510,347 + QEN71_RS31900 0.79 -1.2 510,348 - QEN71_RS31900 0.79 -1.4 510,390 - QEN71_RS31900 0.83 -0.4 510,480 - +0.8 510,480 - -0.7
Or see this region's nucleotide sequence