Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS22085

Experiment: Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
4,898,781	-		QEN71_RS22075	0.75	-2.3
4,898,781	-		QEN71_RS22075	0.75	-0.4
4,898,781	-		QEN71_RS22075	0.75	-0.1
4,898,781	-		QEN71_RS22075	0.75	-0.1
4,898,781	-		QEN71_RS22075	0.75	+0.7
4,898,781	-		QEN71_RS22075	0.75	-0.3
4,898,781	-		QEN71_RS22075	0.75	-0.3
4,898,781	-		QEN71_RS22075	0.75	-1.9
4,898,781	-		QEN71_RS22075	0.75	-0.6
4,898,781	-		QEN71_RS22075	0.75	-1.9
4,898,800	+		QEN71_RS22075	0.77	+0.2
4,898,800	+		QEN71_RS22075	0.77	-1.3
4,898,800	+		QEN71_RS22075	0.77	+1.4
4,898,801	-		QEN71_RS22075	0.77	+0.6
4,898,801	-		QEN71_RS22075	0.77	+0.1
4,898,801	-		QEN71_RS22075	0.77	-0.4
4,898,801	-		QEN71_RS22075	0.77	-2.0
4,898,818	+		QEN71_RS22075	0.79	+0.0
4,898,818	+		QEN71_RS22075	0.79	-1.1
4,898,965	-				-0.4
4,898,978	-				+0.3
4,899,005	-				-2.3
4,899,107	+				-0.1
4,899,107	+				-2.7
4,899,107	+				-0.7
4,899,107	+				-0.7
4,899,107	+				+0.1
4,899,107	+				-0.1
4,899,107	+				-1.8
4,899,108	-				+0.9
4,899,108	-				+1.1
4,899,108	-				-1.7
4,899,108	-				-0.2
4,899,108	-				+1.6
4,899,108	-				-0.3
4,899,108	-				-0.1
4,899,108	-				+2.3
4,899,108	-				-1.4
4,899,108	-				+0.7
4,899,108	-				+0.6
4,899,108	-				-0.1
4,899,108	-				+0.3
4,899,108	-				-1.0
4,899,108	-				-0.6
4,899,108	-				-0.3
4,899,108	-				-0.4
4,899,187	+				-0.1
4,899,187	+				+0.1
4,899,187	+				-0.3
4,899,230	+				-1.1
4,899,231	-				+0.1
4,899,231	-				+0.5
4,899,231	-				+0.7
4,899,231	-				+1.0
4,899,231	-				-0.7
4,899,231	-				-0.7
4,899,231	-				-1.1
4,899,231	-				+0.9
4,899,231	-				-0.7
4,899,413	+		QEN71_RS22080	0.42	-2.5
4,899,413	+		QEN71_RS22080	0.42	-1.6
4,899,413	+		QEN71_RS22080	0.42	+0.5
4,899,413	+		QEN71_RS22080	0.42	-0.6
4,899,413	+		QEN71_RS22080	0.42	+1.8
4,899,413	+		QEN71_RS22080	0.42	+1.0
4,899,413	+		QEN71_RS22080	0.42	-1.8
4,899,413	+		QEN71_RS22080	0.42	-0.6
4,899,413	+		QEN71_RS22080	0.42	+0.6
4,899,413	+		QEN71_RS22080	0.42	+1.3
4,899,413	+		QEN71_RS22080	0.42	-0.1
4,899,413	+		QEN71_RS22080	0.42	-0.3
4,899,414	-		QEN71_RS22080	0.42	+1.4
4,899,414	-		QEN71_RS22080	0.42	+1.6
4,899,414	-		QEN71_RS22080	0.42	-0.3
4,899,414	-		QEN71_RS22080	0.42	-0.1
4,899,414	-		QEN71_RS22080	0.42	-0.9
4,899,414	-		QEN71_RS22080	0.42	-1.1
4,899,414	-		QEN71_RS22080	0.42	-0.9
4,899,414	-		QEN71_RS22080	0.42	+0.3
4,899,414	-		QEN71_RS22080	0.42	+0.7
4,899,414	-		QEN71_RS22080	0.42	+1.9
4,899,414	-		QEN71_RS22080	0.42	-1.7
4,899,414	-		QEN71_RS22080	0.42	+2.6
4,899,414	-		QEN71_RS22080	0.42	-1.5
4,899,414	-		QEN71_RS22080	0.42	-1.5
4,899,414	-		QEN71_RS22080	0.42	-2.3
4,899,445	+		QEN71_RS22080	0.49	-0.6
4,899,445	+		QEN71_RS22080	0.49	-1.4
4,899,445	+		QEN71_RS22080	0.49	-1.5
4,899,446	-		QEN71_RS22080	0.50	-0.3
4,899,446	-		QEN71_RS22080	0.50	-1.6
4,899,678	+				+0.2
4,899,678	+				+0.7
4,899,679	-				-0.7
4,899,679	-				-1.7
4,899,679	-				+1.1
4,899,679	-				+0.5
4,899,679	-				-0.4
4,900,072	+		QEN71_RS22085	0.15	-1.5
4,900,073	-		QEN71_RS22085	0.15	+0.5
4,900,437	+		QEN71_RS22085	0.33	+0.1
4,900,437	+		QEN71_RS22085	0.33	-1.2
4,900,437	+		QEN71_RS22085	0.33	-3.9
4,900,438	-		QEN71_RS22085	0.33	-1.0
4,900,487	+		QEN71_RS22085	0.35	-0.4
4,900,487	+		QEN71_RS22085	0.35	+0.5
4,900,487	+		QEN71_RS22085	0.35	+0.6
4,900,488	-		QEN71_RS22085	0.35	-1.8
4,900,488	-		QEN71_RS22085	0.35	-0.2
4,900,488	-		QEN71_RS22085	0.35	+0.1
4,900,488	-		QEN71_RS22085	0.35	-0.3
4,900,488	-		QEN71_RS22085	0.35	-1.7
4,900,488	-		QEN71_RS22085	0.35	-0.3
4,900,488	-		QEN71_RS22085	0.35	+1.1
4,900,488	-		QEN71_RS22085	0.35	-1.1
4,900,488	-		QEN71_RS22085	0.35	+0.9
4,900,488	-		QEN71_RS22085	0.35	-0.5
4,900,767	+		QEN71_RS22085	0.49	+0.5
4,901,059	+		QEN71_RS22085	0.64	-0.7
4,901,059	+		QEN71_RS22085	0.64	+0.1
4,901,059	+		QEN71_RS22085	0.64	+0.1
4,901,059	+		QEN71_RS22085	0.64	+0.3
4,901,059	+		QEN71_RS22085	0.64	-0.5
4,901,059	+		QEN71_RS22085	0.64	+0.9
4,901,059	+		QEN71_RS22085	0.64	+1.3
4,901,060	-		QEN71_RS22085	0.64	-1.1
4,901,060	-		QEN71_RS22085	0.64	+1.5
4,901,060	-		QEN71_RS22085	0.64	-0.4
4,901,060	-		QEN71_RS22085	0.64	+0.3
4,901,060	-		QEN71_RS22085	0.64	-0.2
4,901,060	-		QEN71_RS22085	0.64	+1.3
4,901,060	-		QEN71_RS22085	0.64	-0.5
4,901,060	-		QEN71_RS22085	0.64	-0.3
4,901,076	-		QEN71_RS22085	0.65	+0.5
4,901,234	+		QEN71_RS22085	0.73	-0.5
4,901,234	+		QEN71_RS22085	0.73	-1.1
4,901,235	-		QEN71_RS22085	0.73	+0.7
4,901,417	+		QEN71_RS22085	0.82	-0.0
4,901,417	+		QEN71_RS22085	0.82	+1.3
4,901,417	+		QEN71_RS22085	0.82	+1.0
4,901,418	-		QEN71_RS22085	0.82	-0.7
4,901,418	-		QEN71_RS22085	0.82	+0.3
4,901,418	-		QEN71_RS22085	0.82	-0.1
4,901,426	+		QEN71_RS22085	0.83	+0.6
4,901,426	+		QEN71_RS22085	0.83	-0.3
4,901,426	+		QEN71_RS22085	0.83	-0.5
4,901,426	+		QEN71_RS22085	0.83	-0.5
4,901,427	-		QEN71_RS22085	0.83	-0.5
4,901,427	-		QEN71_RS22085	0.83	-1.8
4,901,523	+		QEN71_RS22085	0.87	-0.1
4,901,524	-		QEN71_RS22085	0.88	+1.1
4,901,524	-		QEN71_RS22085	0.88	+1.2
4,901,524	-		QEN71_RS22085	0.88	-0.7
4,901,524	-		QEN71_RS22085	0.88	-1.4
4,901,524	-		QEN71_RS22085	0.88	+0.2
4,901,524	-		QEN71_RS22085	0.88	-0.7
4,901,524	-		QEN71_RS22085	0.88	-1.0
4,901,588	+				-0.7
4,901,589	-				+1.6
4,901,589	-				+0.1
4,901,589	-				+2.0
4,901,758	+				-0.9
4,901,758	+				+0.4
4,901,758	+				-0.5
4,901,758	+				+0.3
4,901,758	+				-0.2
4,901,759	-				-0.3
4,901,759	-				-0.1
4,901,759	-				+0.0
4,901,759	-				-1.1
4,901,759	-				-2.1
4,901,759	-				+0.3
4,901,759	-				-0.1
4,901,759	-				-1.6
4,901,759	-				+0.1
4,901,872	+				+0.5
4,901,872	+				-0.3
4,901,872	+				+0.0
4,901,872	+				+0.5
4,901,873	-				-1.3
4,901,873	-				-0.7
4,901,947	+		QEN71_RS22090	0.18	-0.1
4,901,947	+		QEN71_RS22090	0.18	-0.1
4,901,947	+		QEN71_RS22090	0.18	+0.9
4,901,948	-		QEN71_RS22090	0.18	-1.3
4,901,948	-		QEN71_RS22090	0.18	-0.6
4,901,948	-		QEN71_RS22090	0.18	-0.3
4,901,948	-		QEN71_RS22090	0.18	-1.3
4,901,948	-		QEN71_RS22090	0.18	-1.2
4,901,968	+		QEN71_RS22090	0.22	-0.5
4,901,968	+		QEN71_RS22090	0.22	+0.8
4,901,968	+		QEN71_RS22090	0.22	-0.7
4,901,969	-		QEN71_RS22090	0.22	-0.4
4,901,969	-		QEN71_RS22090	0.22	-0.4
4,901,969	-		QEN71_RS22090	0.22	-0.9
4,901,969	-		QEN71_RS22090	0.22	-0.5
4,901,969	-		QEN71_RS22090	0.22	+0.7
4,901,969	-		QEN71_RS22090	0.22	-1.3
4,901,969	-		QEN71_RS22090	0.22	-0.9
4,901,969	-		QEN71_RS22090	0.22	-1.0
4,901,969	-		QEN71_RS22090	0.22	-0.6
4,901,969	-		QEN71_RS22090	0.22	-1.5
4,901,989	+		QEN71_RS22090	0.26	+0.9
4,901,989	+		QEN71_RS22090	0.26	-1.6
4,901,989	+		QEN71_RS22090	0.26	+1.5
4,901,989	+		QEN71_RS22090	0.26	-1.8
4,901,990	-		QEN71_RS22090	0.27	-0.8
4,901,990	-		QEN71_RS22090	0.27	-0.3
4,901,990	-		QEN71_RS22090	0.27	-0.7
4,902,026	+		QEN71_RS22090	0.34	+1.9
4,902,026	+		QEN71_RS22090	0.34	-0.3
4,902,026	+		QEN71_RS22090	0.34	+0.0
4,902,027	-		QEN71_RS22090	0.34	-0.3
4,902,130	+		QEN71_RS22090	0.55	+1.1
4,902,130	+		QEN71_RS22090	0.55	+0.1
4,902,130	+		QEN71_RS22090	0.55	-0.2
4,902,130	+		QEN71_RS22090	0.55	-0.7
4,902,131	-		QEN71_RS22090	0.55	+0.0
4,902,131	-		QEN71_RS22090	0.55	-0.1
4,902,131	-		QEN71_RS22090	0.55	-0.9
4,902,131	-		QEN71_RS22090	0.55	-0.1
4,902,199	+		QEN71_RS22090	0.69	-0.1
4,902,199	+		QEN71_RS22090	0.69	-1.7
4,902,199	+		QEN71_RS22090	0.69	+1.3
4,902,199	+		QEN71_RS22090	0.69	-1.7
4,902,200	-		QEN71_RS22090	0.69	-1.0
4,902,200	-		QEN71_RS22090	0.69	+0.1
4,902,200	-		QEN71_RS22090	0.69	+0.0
4,902,200	-		QEN71_RS22090	0.69	+0.4
4,902,273	+		QEN71_RS22090	0.84	-0.3
4,902,273	+		QEN71_RS22090	0.84	-0.3
4,902,273	+		QEN71_RS22090	0.84	-0.7
4,902,375	+				+2.1
4,902,375	+				-0.2
4,902,375	+				+0.9
4,902,376	-				-1.0
4,902,376	-				-0.3
4,902,376	-				-0.7
4,902,376	-				-1.6
4,902,433	+				+0.3
4,902,433	+				+0.0
4,902,433	+				-0.4
4,902,433	+				+0.7
4,902,433	+				+0.1
4,902,433	+				-1.1
4,902,434	-				-0.5
4,902,434	-				-0.1
4,902,434	-				-0.2
4,902,451	-				-2.4
4,902,451	-				-0.8
4,902,453	+				-0.2
4,902,453	+				-0.2
4,902,453	+				-0.0
4,902,453	+				-0.1
4,902,453	+				+0.1
4,902,454	-				-1.4
4,902,454	-				-1.5
4,902,454	-				-1.1
4,902,454	-				-1.0
4,902,454	-				-0.8
4,902,691	+		QEN71_RS22095	0.11	-2.4
4,902,691	+		QEN71_RS22095	0.11	-0.4
4,902,692	-		QEN71_RS22095	0.11	-2.0
4,902,702	+		QEN71_RS22095	0.11	+1.4
4,902,702	+		QEN71_RS22095	0.11	-0.9
4,902,702	+		QEN71_RS22095	0.11	-0.7
4,902,702	+		QEN71_RS22095	0.11	-2.4
4,902,702	+		QEN71_RS22095	0.11	-0.8
4,902,702	+		QEN71_RS22095	0.11	-1.1
4,902,702	+		QEN71_RS22095	0.11	+0.4
4,902,702	+		QEN71_RS22095	0.11	+1.1
4,902,702	+		QEN71_RS22095	0.11	-1.2
4,902,702	+		QEN71_RS22095	0.11	-0.2
4,902,702	+		QEN71_RS22095	0.11	+1.9
4,902,703	-		QEN71_RS22095	0.11	-1.8
4,902,703	-		QEN71_RS22095	0.11	-3.8
4,902,703	-		QEN71_RS22095	0.11	-1.8
4,902,703	-		QEN71_RS22095	0.11	-1.2
4,902,703	-		QEN71_RS22095	0.11	-1.7
4,902,703	-		QEN71_RS22095	0.11	-1.4
4,902,703	-		QEN71_RS22095	0.11	-1.8
4,902,703	-		QEN71_RS22095	0.11	-2.0
4,902,703	-		QEN71_RS22095	0.11	-0.9
4,902,703	-		QEN71_RS22095	0.11	-1.1
4,902,703	-		QEN71_RS22095	0.11	-0.7
4,902,704	+		QEN71_RS22095	0.11	-0.4
4,902,704	+		QEN71_RS22095	0.11	-0.1
4,902,704	+		QEN71_RS22095	0.11	-1.8
4,902,704	+		QEN71_RS22095	0.11	+0.8
4,902,704	+		QEN71_RS22095	0.11	-0.5
4,902,704	+		QEN71_RS22095	0.11	+0.3
4,902,704	+		QEN71_RS22095	0.11	+2.6
4,902,704	+		QEN71_RS22095	0.11	-0.8
4,902,704	+		QEN71_RS22095	0.11	-0.8
4,902,704	+		QEN71_RS22095	0.11	+0.2
4,902,704	+		QEN71_RS22095	0.11	-0.2
4,902,704	+		QEN71_RS22095	0.11	-0.9
4,902,704	+		QEN71_RS22095	0.11	-1.2
4,902,704	+		QEN71_RS22095	0.11	+1.9
4,902,705	-		QEN71_RS22095	0.11	-0.3
4,902,705	-		QEN71_RS22095	0.11	-1.7
4,902,705	-		QEN71_RS22095	0.11	-1.5
4,902,705	-		QEN71_RS22095	0.11	-1.6
4,902,705	-		QEN71_RS22095	0.11	-1.6
4,902,705	-		QEN71_RS22095	0.11	-2.1
4,902,705	-		QEN71_RS22095	0.11	-2.2
4,902,705	-		QEN71_RS22095	0.11	-2.2
4,902,705	-		QEN71_RS22095	0.11	-1.7
4,902,705	-		QEN71_RS22095	0.11	-2.6
4,902,705	-		QEN71_RS22095	0.11	-2.3
4,902,705	-		QEN71_RS22095	0.11	-1.8
4,902,705	-		QEN71_RS22095	0.11	-1.9
4,902,743	+		QEN71_RS22095	0.14	+0.0
4,902,743	+		QEN71_RS22095	0.14	-1.2
4,902,743	+		QEN71_RS22095	0.14	+1.2
4,902,743	+		QEN71_RS22095	0.14	-0.9
4,902,743	+		QEN71_RS22095	0.14	-0.4
4,902,743	+		QEN71_RS22095	0.14	-1.5
4,902,743	+		QEN71_RS22095	0.14	-0.3
4,902,744	-		QEN71_RS22095	0.14	-1.5
4,902,744	-		QEN71_RS22095	0.14	-1.3
4,902,744	-		QEN71_RS22095	0.14	-1.3
4,902,744	-		QEN71_RS22095	0.14	-2.0
4,902,744	-		QEN71_RS22095	0.14	-0.9
4,902,744	-		QEN71_RS22095	0.14	-2.0