Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS17645

Experiment: Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
3,921,979	+		QEN71_RS17635	0.72	-0.0
3,921,979	+		QEN71_RS17635	0.72	-2.8
3,921,979	+		QEN71_RS17635	0.72	-0.8
3,921,979	+		QEN71_RS17635	0.72	-1.6
3,921,979	+		QEN71_RS17635	0.72	-1.0
3,921,979	+		QEN71_RS17635	0.72	-1.2
3,921,979	+		QEN71_RS17635	0.72	-1.0
3,921,979	+		QEN71_RS17635	0.72	+0.4
3,921,979	+		QEN71_RS17635	0.72	-3.2
3,921,980	-		QEN71_RS17635	0.72	+0.0
3,921,980	-		QEN71_RS17635	0.72	-0.9
3,921,980	-		QEN71_RS17635	0.72	-0.5
3,921,980	-		QEN71_RS17635	0.72	+0.2
3,921,980	-		QEN71_RS17635	0.72	-1.6
3,921,980	-		QEN71_RS17635	0.72	-0.2
3,922,109	+		QEN71_RS17635	0.88	+0.4
3,922,109	+		QEN71_RS17635	0.88	-1.6
3,922,109	+		QEN71_RS17635	0.88	-1.6
3,922,109	+		QEN71_RS17635	0.88	+1.9
3,922,110	-		QEN71_RS17635	0.89	-1.5
3,922,110	-		QEN71_RS17635	0.89	-1.4
3,922,180	+				-1.1
3,922,180	+				-0.2
3,922,348	+		QEN71_RS17640	0.21	+0.4
3,922,348	+		QEN71_RS17640	0.21	-2.0
3,922,348	+		QEN71_RS17640	0.21	-2.3
3,922,349	-		QEN71_RS17640	0.21	-2.7
3,922,590	+		QEN71_RS17640	0.55	-3.5
3,922,590	+		QEN71_RS17640	0.55	-4.3
3,922,591	-		QEN71_RS17640	0.56	-4.0
3,922,591	-		QEN71_RS17640	0.56	-1.4
3,922,591	-		QEN71_RS17640	0.56	-0.6
3,922,591	-		QEN71_RS17640	0.56	-1.1
3,922,623	+		QEN71_RS17640	0.60	-3.8
3,922,623	+		QEN71_RS17640	0.60	-4.9
3,922,623	+		QEN71_RS17640	0.60	-3.6
3,922,623	+		QEN71_RS17640	0.60	-4.1
3,922,623	+		QEN71_RS17640	0.60	-2.9
3,922,623	+		QEN71_RS17640	0.60	-2.7
3,922,624	-		QEN71_RS17640	0.60	+0.4
3,922,624	-		QEN71_RS17640	0.60	-1.4
3,922,624	-		QEN71_RS17640	0.60	-1.5
3,922,627	+		QEN71_RS17640	0.61	-0.8
3,922,627	+		QEN71_RS17640	0.61	-4.8
3,922,627	+		QEN71_RS17640	0.61	-1.6
3,922,627	+		QEN71_RS17640	0.61	-1.4
3,922,628	-		QEN71_RS17640	0.61	-1.0
3,922,628	-		QEN71_RS17640	0.61	-1.2
3,922,628	-		QEN71_RS17640	0.61	-0.2
3,922,628	-		QEN71_RS17640	0.61	-1.6
3,922,672	+		QEN71_RS17640	0.67	-0.2
3,922,672	+		QEN71_RS17640	0.67	-2.3
3,922,673	-		QEN71_RS17640	0.67	-1.1
3,922,707	+		QEN71_RS17640	0.72	+0.4
3,922,707	+		QEN71_RS17640	0.72	-2.9
3,922,707	+		QEN71_RS17640	0.72	-1.4
3,922,707	+		QEN71_RS17640	0.72	-1.1
3,922,707	+		QEN71_RS17640	0.72	-3.5
3,922,707	+		QEN71_RS17640	0.72	-3.6
3,922,707	+		QEN71_RS17640	0.72	-2.2
3,922,707	+		QEN71_RS17640	0.72	-2.3
3,922,707	+		QEN71_RS17640	0.72	-1.6
3,922,708	-		QEN71_RS17640	0.72	+0.4
3,922,708	-		QEN71_RS17640	0.72	-0.4
3,922,766	+		QEN71_RS17640	0.80	-1.0
3,922,766	+		QEN71_RS17640	0.80	-1.3
3,922,766	+		QEN71_RS17640	0.80	-2.6
3,922,766	+		QEN71_RS17640	0.80	-3.3
3,922,766	+		QEN71_RS17640	0.80	-4.0
3,922,767	-		QEN71_RS17640	0.80	-1.7
3,922,767	-		QEN71_RS17640	0.80	-1.3
3,922,767	-		QEN71_RS17640	0.80	-0.2
3,922,965	+				-0.9
3,922,965	+				+3.9
3,922,965	+				-0.6
3,922,965	+				+1.4
3,922,965	+				-0.6
3,922,965	+				-2.7
3,922,966	-				-0.6
3,923,074	+				-1.4
3,923,122	+		QEN71_RS17645	0.13	+0.4
3,923,123	-		QEN71_RS17645	0.13	+0.0
3,923,149	+		QEN71_RS17645	0.15	-3.7
3,923,149	+		QEN71_RS17645	0.15	-1.3
3,923,194	+		QEN71_RS17645	0.19	-0.4
3,923,195	-		QEN71_RS17645	0.19	-1.0
3,923,371	+		QEN71_RS17645	0.34	-0.2
3,923,371	+		QEN71_RS17645	0.34	-0.6
3,923,371	+		QEN71_RS17645	0.34	+0.0
3,923,371	+		QEN71_RS17645	0.34	-3.5
3,923,371	+		QEN71_RS17645	0.34	-2.3
3,923,371	+		QEN71_RS17645	0.34	-3.3
3,923,371	+		QEN71_RS17645	0.34	-0.4
3,923,372	-		QEN71_RS17645	0.34	+0.0
3,923,372	-		QEN71_RS17645	0.34	+0.0
3,923,372	-		QEN71_RS17645	0.34	-0.2
3,923,530	+		QEN71_RS17645	0.47	-2.3
3,923,530	+		QEN71_RS17645	0.47	-1.7
3,923,530	+		QEN71_RS17645	0.47	-3.2
3,923,530	+		QEN71_RS17645	0.47	-3.3
3,923,530	+		QEN71_RS17645	0.47	-1.4
3,923,530	+		QEN71_RS17645	0.47	-0.4
3,923,530	+		QEN71_RS17645	0.47	-1.9
3,923,530	+		QEN71_RS17645	0.47	-0.2
3,923,530	+		QEN71_RS17645	0.47	-2.8
3,923,530	+		QEN71_RS17645	0.47	-2.6
3,923,530	+		QEN71_RS17645	0.47	-4.3
3,923,530	+		QEN71_RS17645	0.47	-3.6
3,923,530	+		QEN71_RS17645	0.47	-4.0
3,923,531	-		QEN71_RS17645	0.47	+0.4
3,923,531	-		QEN71_RS17645	0.47	+0.4
3,923,531	-		QEN71_RS17645	0.47	+0.0
3,923,531	-		QEN71_RS17645	0.47	-1.0
3,923,827	+		QEN71_RS17645	0.72	+1.4
3,923,827	+		QEN71_RS17645	0.72	-3.1
3,923,827	+		QEN71_RS17645	0.72	-1.1
3,923,828	-		QEN71_RS17645	0.72	+0.4
3,923,828	-		QEN71_RS17645	0.72	+0.0
3,923,828	-		QEN71_RS17645	0.72	-0.2
3,923,828	-		QEN71_RS17645	0.72	-1.3
3,923,944	+		QEN71_RS17645	0.82	-2.9
3,923,944	+		QEN71_RS17645	0.82	-1.8
3,923,944	+		QEN71_RS17645	0.82	-0.4
3,923,944	+		QEN71_RS17645	0.82	-1.8
3,923,944	+		QEN71_RS17645	0.82	-3.3
3,923,945	-		QEN71_RS17645	0.82	-0.6
3,923,945	-		QEN71_RS17645	0.82	-0.8
3,924,043	+				-0.6
3,924,372	+		QEN71_RS17650	0.22	+4.2
3,924,372	+		QEN71_RS17650	0.22	+1.8
3,924,373	-		QEN71_RS17650	0.22	+0.4
3,924,373	-		QEN71_RS17650	0.22	+0.0
3,924,391	-		QEN71_RS17650	0.24	-0.2
3,924,391	-		QEN71_RS17650	0.24	-0.2
3,924,391	-		QEN71_RS17650	0.24	-0.4
3,924,492	+		QEN71_RS17650	0.35	+6.3
3,924,492	+		QEN71_RS17650	0.35	+1.4
3,924,492	+		QEN71_RS17650	0.35	+1.4
3,924,493	-		QEN71_RS17650	0.35	-1.6
3,924,493	-		QEN71_RS17650	0.35	-1.9
3,924,493	-		QEN71_RS17650	0.35	-0.4
3,924,493	-		QEN71_RS17650	0.35	+0.4
3,924,617	+		QEN71_RS17650	0.48	+3.9
3,924,617	+		QEN71_RS17650	0.48	+0.0
3,924,664	-		QEN71_RS17650	0.54	-1.1
3,924,696	+		QEN71_RS17650	0.57	+1.0
3,924,765	+		QEN71_RS17650	0.64	+3.3
3,924,766	-		QEN71_RS17650	0.65	-0.8
3,925,132	+				-4.6