Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS09975

Experiment: Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
2,219,464	+		QEN71_RS09970	0.53	+2.3
2,219,465	-		QEN71_RS09970	0.53	-0.0
2,219,465	-		QEN71_RS09970	0.53	-0.2
2,219,608	+		QEN71_RS09970	0.66	+0.3
2,219,608	+		QEN71_RS09970	0.66	-1.9
2,219,773	+		QEN71_RS09970	0.80	+1.5
2,219,774	-		QEN71_RS09970	0.80	+1.1
2,219,788	+		QEN71_RS09970	0.81	+1.9
2,219,788	+		QEN71_RS09970	0.81	-2.0
2,219,947	+				+1.3
2,219,947	+				-0.1
2,219,948	-				-0.3
2,219,948	-				-0.5
2,219,948	-				-0.6
2,219,998	+				+1.6
2,219,999	-				-0.8
2,220,400	-				-0.9
2,220,527	-				-2.7
2,220,715	+		QEN71_RS09975	0.12	+0.5
2,220,716	-		QEN71_RS09975	0.12	+0.5
2,220,918	+		QEN71_RS09975	0.16	+0.5
2,220,918	+		QEN71_RS09975	0.16	-1.2
2,221,095	+		QEN71_RS09975	0.19	-0.2
2,221,095	+		QEN71_RS09975	0.19	-0.4
2,221,095	+		QEN71_RS09975	0.19	-0.2
2,221,236	+		QEN71_RS09975	0.22	-0.4
2,221,236	+		QEN71_RS09975	0.22	-1.0
2,221,416	+		QEN71_RS09975	0.25	+1.3
2,221,416	+		QEN71_RS09975	0.25	-3.0
2,221,431	+		QEN71_RS09975	0.25	-2.1
2,221,488	+		QEN71_RS09975	0.26	+1.9
2,221,488	+		QEN71_RS09975	0.26	+0.1
2,221,489	-		QEN71_RS09975	0.26	+0.2
2,221,489	-		QEN71_RS09975	0.26	+0.4
2,221,863	+		QEN71_RS09975	0.33	-0.7
2,221,869	+		QEN71_RS09975	0.33	+0.1
2,221,887	+		QEN71_RS09975	0.33	+0.4
2,221,888	-		QEN71_RS09975	0.33	-0.5
2,221,888	-		QEN71_RS09975	0.33	+1.2
2,221,888	-		QEN71_RS09975	0.33	+1.0
2,221,891	+		QEN71_RS09975	0.33	+2.4
2,221,891	+		QEN71_RS09975	0.33	+0.4
2,221,891	+		QEN71_RS09975	0.33	+0.6
2,221,891	+		QEN71_RS09975	0.33	-0.9
2,221,891	+		QEN71_RS09975	0.33	-1.1
2,221,892	-		QEN71_RS09975	0.33	+1.3
2,221,923	+		QEN71_RS09975	0.34	-0.8
2,221,924	-		QEN71_RS09975	0.34	-0.2
2,222,004	+		QEN71_RS09975	0.35	-1.0
2,222,005	-		QEN71_RS09975	0.35	+1.1
2,222,005	-		QEN71_RS09975	0.35	-2.1
2,222,007	-		QEN71_RS09975	0.35	-1.0
2,222,178	+		QEN71_RS09975	0.39	-1.0
2,222,179	-		QEN71_RS09975	0.39	+2.0
2,222,205	+		QEN71_RS09975	0.39	+0.4
2,222,205	+		QEN71_RS09975	0.39	+0.1
2,222,205	+		QEN71_RS09975	0.39	+1.0
2,222,215	-		QEN71_RS09975	0.39	-0.7
2,222,249	+		QEN71_RS09975	0.40	-1.0
2,222,249	+		QEN71_RS09975	0.40	-2.0
2,222,249	+		QEN71_RS09975	0.40	+2.0
2,222,293	-		QEN71_RS09975	0.41	-0.9
2,222,293	-		QEN71_RS09975	0.41	+0.6
2,222,307	+		QEN71_RS09975	0.41	+0.3
2,222,602	-		QEN71_RS09975	0.46	-1.2
2,222,602	-		QEN71_RS09975	0.46	-1.6
2,222,718	+		QEN71_RS09975	0.48	-2.1
2,222,718	+		QEN71_RS09975	0.48	+0.1
2,222,767	-		QEN71_RS09975	0.49	+0.3
2,222,799	+		QEN71_RS09975	0.50	-0.5
2,222,799	+		QEN71_RS09975	0.50	+0.1
2,222,800	-		QEN71_RS09975	0.50	-1.8
2,222,800	-		QEN71_RS09975	0.50	+0.2
2,222,800	-		QEN71_RS09975	0.50	+0.5
2,222,864	-		QEN71_RS09975	0.51	-2.3
2,223,168	+		QEN71_RS09975	0.56	-1.0
2,223,169	-		QEN71_RS09975	0.56	-0.2
2,223,169	-		QEN71_RS09975	0.56	-2.4
2,223,169	-		QEN71_RS09975	0.56	+1.3
2,223,372	+		QEN71_RS09975	0.60	+0.7
2,223,372	+		QEN71_RS09975	0.60	-1.5
2,223,373	-		QEN71_RS09975	0.60	+0.1
2,223,606	+		QEN71_RS09975	0.64	-1.3
2,223,620	+		QEN71_RS09975	0.64	-0.3
2,223,642	+		QEN71_RS09975	0.65	-0.7
2,223,643	-		QEN71_RS09975	0.65	-1.7
2,223,723	+		QEN71_RS09975	0.66	+1.3
2,223,723	+		QEN71_RS09975	0.66	-1.6
2,223,724	-		QEN71_RS09975	0.66	-1.2
2,223,754	+		QEN71_RS09975	0.67	-0.1
2,223,849	+		QEN71_RS09975	0.68	+0.1
2,223,849	+		QEN71_RS09975	0.68	-1.2
2,223,850	-		QEN71_RS09975	0.68	+1.0
2,223,850	-		QEN71_RS09975	0.68	+1.2
2,224,164	+		QEN71_RS09975	0.74	-0.2
2,224,530	+		QEN71_RS09975	0.81	+1.1
2,224,548	+		QEN71_RS09975	0.81	-1.2
2,224,549	-		QEN71_RS09975	0.81	+0.4
2,224,709	-		QEN71_RS09975	0.84	-1.0
2,225,032	-		QEN71_RS09975	0.90	+0.5
2,225,052	+		QEN71_RS09975	0.90	-1.2
2,225,053	-				-0.7
2,225,053	-				+0.1
2,225,112	+				+0.6
2,225,112	+				-0.5
2,225,112	+				+0.5
2,225,112	+				-0.3
2,225,112	+				+1.1
2,225,112	+				-1.7
2,225,113	-				-1.7
2,225,113	-				+0.7
2,225,113	-				-0.2
2,225,113	-				+0.3
2,225,249	-				+0.1
2,225,275	-				-0.5
2,225,571	+				+0.1
2,225,613	+				+0.0
2,225,613	+				+0.9
2,225,613	+				+0.5
2,225,614	-				-0.8
2,225,614	-				+0.3
2,225,701	+				-1.5
2,225,743	+				+1.6
2,225,743	+				-0.5
2,225,743	+				-0.8
2,225,744	-				+0.0
2,225,744	-				+1.3
2,225,744	-				-0.2
2,225,754	+				-1.2
2,225,754	+				-0.3
2,225,754	+				-0.5
2,225,755	-				+0.9
2,225,755	-				-1.2
2,225,791	+				+1.5
2,225,874	+				-1.0
2,225,874	+				+1.1
2,225,875	-				-0.5
2,226,019	+				+0.1
2,226,019	+				+3.1
2,226,019	+				-0.6
2,226,020	-				+1.1
2,226,215	+		QEN71_RS09980	0.26	-0.1
2,226,215	+		QEN71_RS09980	0.26	-1.0
2,226,215	+		QEN71_RS09980	0.26	+0.7
2,226,215	+		QEN71_RS09980	0.26	-0.2
2,226,216	-		QEN71_RS09980	0.26	-0.3
2,226,286	+		QEN71_RS09980	0.34	+0.2
2,226,286	+		QEN71_RS09980	0.34	+1.7
2,226,286	+		QEN71_RS09980	0.34	+0.9
2,226,286	+		QEN71_RS09980	0.34	+0.1
2,226,286	+		QEN71_RS09980	0.34	+0.3
2,226,287	-		QEN71_RS09980	0.34	+1.8
2,226,287	-		QEN71_RS09980	0.34	-0.2
2,226,287	-		QEN71_RS09980	0.34	-0.0
2,226,287	-		QEN71_RS09980	0.34	+0.1
2,226,287	-		QEN71_RS09980	0.34	-0.6
2,226,287	-		QEN71_RS09980	0.34	-0.0
2,226,288	+		QEN71_RS09980	0.35	-0.2
2,226,288	+		QEN71_RS09980	0.35	+0.1
2,226,288	+		QEN71_RS09980	0.35	-1.3
2,226,288	+		QEN71_RS09980	0.35	+6.9
2,226,288	+		QEN71_RS09980	0.35	+0.5
2,226,288	+		QEN71_RS09980	0.35	+0.2
2,226,288	+		QEN71_RS09980	0.35	-0.7
2,226,288	+		QEN71_RS09980	0.35	-2.5
2,226,288	+		QEN71_RS09980	0.35	-0.0
2,226,288	+		QEN71_RS09980	0.35	-0.5
2,226,288	+		QEN71_RS09980	0.35	+0.1
2,226,288	+		QEN71_RS09980	0.35	-0.2
2,226,289	-		QEN71_RS09980	0.35	+2.9
2,226,289	-		QEN71_RS09980	0.35	-0.6
2,226,289	-		QEN71_RS09980	0.35	+1.4
2,226,289	-		QEN71_RS09980	0.35	+0.6
2,226,289	-		QEN71_RS09980	0.35	-0.0
2,226,289	-		QEN71_RS09980	0.35	-1.3
2,226,289	-		QEN71_RS09980	0.35	-1.6
2,226,289	-		QEN71_RS09980	0.35	+1.1
2,226,309	-		QEN71_RS09980	0.37	+0.1
2,226,357	+		QEN71_RS09980	0.43	-0.6
2,226,357	+		QEN71_RS09980	0.43	-0.6
2,226,357	+		QEN71_RS09980	0.43	-1.1
2,226,358	-		QEN71_RS09980	0.43	-1.2
2,226,358	-		QEN71_RS09980	0.43	-0.7
2,226,453	+		QEN71_RS09980	0.55	+0.0
2,226,453	+		QEN71_RS09980	0.55	-1.2
2,226,453	+		QEN71_RS09980	0.55	+0.3
2,226,454	-		QEN71_RS09980	0.55	+0.1
2,226,454	-		QEN71_RS09980	0.55	+1.6
2,226,454	-		QEN71_RS09980	0.55	-0.3
2,226,454	-		QEN71_RS09980	0.55	+0.4
2,226,454	-		QEN71_RS09980	0.55	+1.5
2,226,454	-		QEN71_RS09980	0.55	+0.5
2,226,454	-		QEN71_RS09980	0.55	+0.1
2,226,590	-		QEN71_RS09980	0.72	+0.7