Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS07960

Experiment: Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
1,761,684	+		QEN71_RS07950	0.87	-1.8
1,761,685	-		QEN71_RS07950	0.87	-0.8
1,761,685	-		QEN71_RS07950	0.87	+0.5
1,761,685	-		QEN71_RS07950	0.87	+1.4
1,761,685	-		QEN71_RS07950	0.87	+0.6
1,761,685	-		QEN71_RS07950	0.87	-0.9
1,761,747	+				+0.8
1,761,747	+				-2.6
1,761,747	+				+1.4
1,761,747	+				+1.2
1,761,747	+				-0.9
1,761,747	+				-0.4
1,761,748	-				-0.0
1,761,790	+				-0.1
1,761,790	+				+0.5
1,761,790	+				+1.9
1,761,790	+				-0.4
1,761,790	+				-1.1
1,761,790	+				-1.6
1,761,790	+				+0.4
1,761,790	+				-0.3
1,761,791	-				-0.5
1,761,791	-				-0.4
1,761,791	-				-2.8
1,761,791	-				-0.0
1,761,791	-				-2.2
1,761,791	-				-1.1
1,761,791	-				-1.6
1,761,791	-				-2.1
1,761,791	-				+0.8
1,761,791	-				+1.2
1,761,791	-				-1.1
1,761,791	-				+0.4
1,761,791	-				-0.9
1,761,791	-				+0.8
1,761,791	-				-0.3
1,761,826	+				-0.4
1,761,826	+				+0.8
1,761,827	-				-1.5
1,761,893	-		QEN71_RS07955	0.20	-0.7
1,762,019	+		QEN71_RS07955	0.40	+0.4
1,762,144	+		QEN71_RS07955	0.60	-1.4
1,762,144	+		QEN71_RS07955	0.60	-0.5
1,762,145	-		QEN71_RS07955	0.60	-1.2
1,762,166	-		QEN71_RS07955	0.63	-0.7
1,762,180	+		QEN71_RS07955	0.66	-0.6
1,762,180	+		QEN71_RS07955	0.66	-0.0
1,762,213	+		QEN71_RS07955	0.71	+1.2
1,762,213	+		QEN71_RS07955	0.71	-1.1
1,762,213	+		QEN71_RS07955	0.71	+0.9
1,762,213	+		QEN71_RS07955	0.71	+0.2
1,762,213	+		QEN71_RS07955	0.71	+0.1
1,762,214	-		QEN71_RS07955	0.71	-0.3
1,762,214	-		QEN71_RS07955	0.71	+1.0
1,762,214	-		QEN71_RS07955	0.71	-0.5
1,762,214	-		QEN71_RS07955	0.71	-0.4
1,762,214	-		QEN71_RS07955	0.71	+1.7
1,762,264	+		QEN71_RS07955	0.79	-2.2
1,762,264	+		QEN71_RS07955	0.79	-1.4
1,762,264	+		QEN71_RS07955	0.79	+0.5
1,762,265	-		QEN71_RS07955	0.79	-0.4
1,762,265	-		QEN71_RS07955	0.79	-0.4
1,762,315	+		QEN71_RS07955	0.87	-2.4
1,762,315	+		QEN71_RS07955	0.87	+0.5
1,762,315	+		QEN71_RS07955	0.87	-0.6
1,762,315	+		QEN71_RS07955	0.87	-1.3
1,762,316	-		QEN71_RS07955	0.87	-0.9
1,762,316	-		QEN71_RS07955	0.87	+2.2
1,762,316	-		QEN71_RS07955	0.87	-1.0
1,762,316	-		QEN71_RS07955	0.87	-0.8
1,762,321	-		QEN71_RS07955	0.88	-1.7
1,762,321	-		QEN71_RS07955	0.88	-0.7
1,762,338	+				-1.0
1,762,388	+				-0.3
1,762,388	+				+1.5
1,762,388	+				-0.6
1,762,388	+				+0.2
1,762,388	+				-0.5
1,762,388	+				+0.8
1,762,388	+				-0.7
1,762,389	-				-1.0
1,762,389	-				-0.1
1,762,389	-				+1.2
1,762,420	+				+2.5
1,762,420	+				-1.2
1,762,421	-				+0.7
1,762,421	-				+1.1
1,762,421	-				+1.2
1,762,464	+				-0.1
1,762,464	+				-0.1
1,762,464	+				+0.2
1,762,519	+				+0.5
1,762,519	+				-0.1
1,762,519	+				-3.0
1,762,519	+				-2.4
1,762,519	+				-0.4
1,762,519	+				-0.7
1,762,519	+				+1.5
1,762,519	+				-0.2
1,762,520	-				+0.8
1,762,520	-				+0.8
1,762,520	-				+0.8
1,762,520	-				+0.1
1,762,520	-				+0.8
1,762,658	+				+0.3
1,762,658	+				+0.4
1,762,658	+				-1.0
1,762,659	-				-2.0
1,762,659	-				+1.0
1,762,667	+				-0.6
1,762,668	-				-0.7
1,762,817	+		QEN71_RS07960	0.16	-0.8
1,762,817	+		QEN71_RS07960	0.16	-3.0
1,762,817	+		QEN71_RS07960	0.16	+0.6
1,762,817	+		QEN71_RS07960	0.16	-0.5
1,762,817	+		QEN71_RS07960	0.16	+0.1
1,762,818	-		QEN71_RS07960	0.16	+0.2
1,762,818	-		QEN71_RS07960	0.16	-0.2
1,762,818	-		QEN71_RS07960	0.16	-1.8
1,762,818	-		QEN71_RS07960	0.16	+0.6
1,762,818	-		QEN71_RS07960	0.16	+0.8
1,762,818	-		QEN71_RS07960	0.16	+2.5
1,762,818	-		QEN71_RS07960	0.16	+0.5
1,762,818	-		QEN71_RS07960	0.16	+1.9
1,762,818	-		QEN71_RS07960	0.16	-2.3
1,762,818	-		QEN71_RS07960	0.16	-0.8
1,762,910	+		QEN71_RS07960	0.21	+0.5
1,762,910	+		QEN71_RS07960	0.21	-0.3
1,762,910	+		QEN71_RS07960	0.21	-1.7
1,762,910	+		QEN71_RS07960	0.21	+3.0
1,762,910	+		QEN71_RS07960	0.21	-2.1
1,762,910	+		QEN71_RS07960	0.21	-1.1
1,762,911	-		QEN71_RS07960	0.21	-0.1
1,762,911	-		QEN71_RS07960	0.21	-1.0
1,762,911	-		QEN71_RS07960	0.21	+0.3
1,762,911	-		QEN71_RS07960	0.21	+1.1
1,762,911	-		QEN71_RS07960	0.21	+2.3
1,762,911	-		QEN71_RS07960	0.21	-0.5
1,762,911	-		QEN71_RS07960	0.21	-0.3
1,762,931	+		QEN71_RS07960	0.23	-0.6
1,762,931	+		QEN71_RS07960	0.23	-0.4
1,762,931	+		QEN71_RS07960	0.23	+0.2
1,762,931	+		QEN71_RS07960	0.23	-0.0
1,762,931	+		QEN71_RS07960	0.23	-0.5
1,762,931	+		QEN71_RS07960	0.23	-0.7
1,762,931	+		QEN71_RS07960	0.23	-0.4
1,762,932	-		QEN71_RS07960	0.23	-0.2
1,762,932	-		QEN71_RS07960	0.23	-0.2
1,762,932	-		QEN71_RS07960	0.23	-1.5
1,762,932	-		QEN71_RS07960	0.23	-1.3
1,762,932	-		QEN71_RS07960	0.23	+2.9
1,762,932	-		QEN71_RS07960	0.23	-0.6
1,762,932	-		QEN71_RS07960	0.23	-0.8
1,762,932	-		QEN71_RS07960	0.23	-0.4
1,762,932	-		QEN71_RS07960	0.23	-0.0
1,762,932	-		QEN71_RS07960	0.23	-1.7
1,762,932	-		QEN71_RS07960	0.23	-0.3
1,762,932	-		QEN71_RS07960	0.23	-0.0
1,763,306	+		QEN71_RS07960	0.45	+0.2
1,763,306	+		QEN71_RS07960	0.45	-0.4
1,763,306	+		QEN71_RS07960	0.45	+0.2
1,763,306	+		QEN71_RS07960	0.45	+0.7
1,763,306	+		QEN71_RS07960	0.45	-0.7
1,763,306	+		QEN71_RS07960	0.45	-1.2
1,763,306	+		QEN71_RS07960	0.45	-1.1
1,763,306	+		QEN71_RS07960	0.45	+0.2
1,763,306	+		QEN71_RS07960	0.45	-0.7
1,763,306	+		QEN71_RS07960	0.45	+0.7
1,763,306	+		QEN71_RS07960	0.45	+1.7
1,763,306	+		QEN71_RS07960	0.45	-1.0
1,763,307	-		QEN71_RS07960	0.45	-0.5
1,763,307	-		QEN71_RS07960	0.45	+0.9
1,763,307	-		QEN71_RS07960	0.45	-3.9
1,763,307	-		QEN71_RS07960	0.45	+0.9
1,763,307	-		QEN71_RS07960	0.45	-0.1
1,763,307	-		QEN71_RS07960	0.45	+0.0
1,763,307	-		QEN71_RS07960	0.45	-0.2
1,763,307	-		QEN71_RS07960	0.45	+0.2
1,763,307	-		QEN71_RS07960	0.45	-1.4
1,763,307	-		QEN71_RS07960	0.45	-0.0
1,763,307	-		QEN71_RS07960	0.45	-1.4
1,763,307	-		QEN71_RS07960	0.45	-1.3
1,763,378	+		QEN71_RS07960	0.49	-0.3
1,763,378	+		QEN71_RS07960	0.49	+1.4
1,763,379	-		QEN71_RS07960	0.49	-0.1
1,763,379	-		QEN71_RS07960	0.49	+0.8
1,763,379	-		QEN71_RS07960	0.49	-0.6
1,763,379	-		QEN71_RS07960	0.49	-0.1
1,763,379	-		QEN71_RS07960	0.49	+0.4
1,763,379	-		QEN71_RS07960	0.49	+0.8
1,763,388	+		QEN71_RS07960	0.50	-0.7
1,763,388	+		QEN71_RS07960	0.50	-1.3
1,763,388	+		QEN71_RS07960	0.50	-1.0
1,763,388	+		QEN71_RS07960	0.50	-0.8
1,763,388	+		QEN71_RS07960	0.50	+0.2
1,763,388	+		QEN71_RS07960	0.50	+0.5
1,763,388	+		QEN71_RS07960	0.50	-0.9
1,763,388	+		QEN71_RS07960	0.50	-0.1
1,763,388	+		QEN71_RS07960	0.50	-0.1
1,763,388	+		QEN71_RS07960	0.50	-0.6
1,763,389	-		QEN71_RS07960	0.50	+1.4
1,763,389	-		QEN71_RS07960	0.50	+0.5
1,763,389	-		QEN71_RS07960	0.50	-0.3
1,763,389	-		QEN71_RS07960	0.50	-0.0
1,763,389	-		QEN71_RS07960	0.50	-1.6
1,763,501	+		QEN71_RS07960	0.57	+0.2
1,763,501	+		QEN71_RS07960	0.57	-0.3
1,763,502	-		QEN71_RS07960	0.57	-0.1
1,763,502	-		QEN71_RS07960	0.57	-1.4
1,763,502	-		QEN71_RS07960	0.57	+0.2
1,763,621	+		QEN71_RS07960	0.64	+0.2
1,763,621	+		QEN71_RS07960	0.64	-0.3
1,763,621	+		QEN71_RS07960	0.64	-0.3
1,763,621	+		QEN71_RS07960	0.64	+0.5
1,763,621	+		QEN71_RS07960	0.64	+0.3
1,763,621	+		QEN71_RS07960	0.64	+0.7
1,763,621	+		QEN71_RS07960	0.64	+0.9
1,763,621	+		QEN71_RS07960	0.64	-1.4
1,763,621	+		QEN71_RS07960	0.64	-0.1
1,763,621	+		QEN71_RS07960	0.64	-1.1
1,763,621	+		QEN71_RS07960	0.64	-1.1
1,763,622	-		QEN71_RS07960	0.64	+1.2
1,763,622	-		QEN71_RS07960	0.64	+0.0
1,763,622	-		QEN71_RS07960	0.64	-1.6
1,763,622	-		QEN71_RS07960	0.64	-2.1
1,763,622	-		QEN71_RS07960	0.64	-1.6
1,763,622	-		QEN71_RS07960	0.64	+2.0
1,763,622	-		QEN71_RS07960	0.64	-0.4
1,763,622	-		QEN71_RS07960	0.64	-2.6
1,763,678	+		QEN71_RS07960	0.67	+0.1
1,763,678	+		QEN71_RS07960	0.67	-2.6
1,763,678	+		QEN71_RS07960	0.67	-0.0
1,763,678	+		QEN71_RS07960	0.67	-0.5
1,763,679	-		QEN71_RS07960	0.67	+1.4
1,763,679	-		QEN71_RS07960	0.67	-1.3
1,763,679	-		QEN71_RS07960	0.67	-1.3
1,763,679	-		QEN71_RS07960	0.67	+0.8
1,763,679	-		QEN71_RS07960	0.67	-0.6
1,763,679	-		QEN71_RS07960	0.67	+0.4
1,763,679	-		QEN71_RS07960	0.67	+0.4
1,763,679	-		QEN71_RS07960	0.67	+0.3
1,763,705	+		QEN71_RS07960	0.69	-0.8
1,763,706	-		QEN71_RS07960	0.69	+0.9
1,763,706	-		QEN71_RS07960	0.69	+0.2
1,763,783	-		QEN71_RS07960	0.73	-1.6
1,763,798	+		QEN71_RS07960	0.74	-0.5
1,763,799	-		QEN71_RS07960	0.74	+1.1
1,763,827	+		QEN71_RS07960	0.76	-0.9
1,763,827	+		QEN71_RS07960	0.76	+0.8
1,763,827	+		QEN71_RS07960	0.76	-1.3
1,763,828	-		QEN71_RS07960	0.76	-1.1
1,763,828	-		QEN71_RS07960	0.76	+1.5
1,763,828	-		QEN71_RS07960	0.76	-0.1
1,763,828	-		QEN71_RS07960	0.76	-0.4
1,763,981	+		QEN71_RS07960	0.85	+0.4
1,763,981	+		QEN71_RS07960	0.85	-1.3
1,763,981	+		QEN71_RS07960	0.85	+0.1
1,763,981	+		QEN71_RS07960	0.85	-1.4
1,763,981	+		QEN71_RS07960	0.85	+1.3
1,763,981	+		QEN71_RS07960	0.85	-2.3
1,763,982	-		QEN71_RS07960	0.85	+0.2
1,763,982	-		QEN71_RS07960	0.85	-0.6
1,763,982	-		QEN71_RS07960	0.85	-1.2
1,763,982	-		QEN71_RS07960	0.85	+2.7
1,763,982	-		QEN71_RS07960	0.85	+0.2
1,763,982	-		QEN71_RS07960	0.85	+0.0
1,763,982	-		QEN71_RS07960	0.85	-0.1
1,763,982	-		QEN71_RS07960	0.85	+0.1
1,763,982	-		QEN71_RS07960	0.85	+0.6
1,764,248	+				+1.8
1,764,248	+				-0.4
1,764,356	+				-1.3
1,764,356	+				-0.8
1,764,356	+				-0.5
1,764,356	+				+0.7
1,764,356	+				-0.8
1,764,356	+				-2.7
1,764,356	+				+1.9
1,764,356	+				-3.3
1,764,356	+				+0.9
1,764,356	+				+1.2
1,764,356	+				-0.3
1,764,356	+				+0.7
1,764,357	-				+0.4
1,764,357	-				+0.9
1,764,357	-				-0.5
1,764,357	-				+1.5
1,764,357	-				+0.2
1,764,357	-				-2.4
1,764,600	-		QEN71_RS07965	0.35	-0.6
1,764,600	-		QEN71_RS07965	0.35	+1.5
1,764,651	-		QEN71_RS07965	0.41	-1.0
1,764,651	-		QEN71_RS07965	0.41	-1.6
1,764,651	-		QEN71_RS07965	0.41	-1.1
1,764,651	-		QEN71_RS07965	0.41	+0.0
1,764,701	+		QEN71_RS07965	0.46	-1.3
1,764,702	-		QEN71_RS07965	0.46	+0.1
1,764,702	-		QEN71_RS07965	0.46	-0.3
1,764,710	+		QEN71_RS07965	0.47	+1.5
1,764,711	-		QEN71_RS07965	0.47	-0.2
1,764,773	+		QEN71_RS07965	0.54	+0.5
1,764,773	+		QEN71_RS07965	0.54	+0.0
1,764,774	-		QEN71_RS07965	0.54	-0.3
1,764,774	-		QEN71_RS07965	0.54	-0.0
1,764,785	+		QEN71_RS07965	0.55	+0.2
1,764,785	+		QEN71_RS07965	0.55	-0.5
1,764,785	+		QEN71_RS07965	0.55	-0.1
1,764,785	+		QEN71_RS07965	0.55	-0.2
1,764,785	+		QEN71_RS07965	0.55	-3.6
1,764,785	+		QEN71_RS07965	0.55	-1.3
1,764,785	+		QEN71_RS07965	0.55	-0.6
1,764,785	+		QEN71_RS07965	0.55	+0.5
1,764,785	+		QEN71_RS07965	0.55	+0.4
1,764,786	-		QEN71_RS07965	0.55	-1.0
1,764,786	-		QEN71_RS07965	0.55	-0.5
1,764,839	+		QEN71_RS07965	0.61	-1.2
1,764,839	+		QEN71_RS07965	0.61	+0.2
1,764,839	+		QEN71_RS07965	0.61	-1.5
1,765,037	+		QEN71_RS07965	0.81	-0.9
1,765,037	+		QEN71_RS07965	0.81	+1.1
1,765,038	-		QEN71_RS07965	0.82	+0.1
1,765,038	-		QEN71_RS07965	0.82	-0.8
1,765,038	-		QEN71_RS07965	0.82	-0.3
1,765,038	-		QEN71_RS07965	0.82	-0.7
1,765,105	+		QEN71_RS07965	0.89	-0.7
1,765,105	+		QEN71_RS07965	0.89	+1.0
1,765,184	+				-2.3
1,765,184	+				-0.5
1,765,184	+				-1.9
1,765,184	+				-2.4
1,765,184	+				-0.0
1,765,185	-				-1.3
1,765,185	-				+0.1
1,765,185	-				-0.4
1,765,185	-				-0.1
1,765,195	+				+0.2
1,765,195	+				+0.6
1,765,195	+				-0.0
1,765,195	+				-0.2
1,765,196	-				-0.4
1,765,196	-				-0.2
1,765,196	-				-0.2
1,765,196	-				-2.9
1,765,196	-				-0.5