Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03956

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
4,438,661	+		MIT1002_03955	0.17	+0.3
4,438,669	-		MIT1002_03955	0.18	-0.2
4,438,671	+		MIT1002_03955	0.18	+0.1
4,438,687	-		MIT1002_03955	0.20	+2.3
4,438,738	-		MIT1002_03955	0.27	-0.7
4,438,793	-		MIT1002_03955	0.34	+1.7
4,438,823	-		MIT1002_03955	0.38	-0.8
4,439,047	-		MIT1002_03955	0.68	-2.2
4,439,059	-		MIT1002_03955	0.69	-0.2
4,439,060	-		MIT1002_03955	0.69	-0.2
4,439,201	+		MIT1002_03955	0.88	+0.1
4,439,214	-		MIT1002_03955	0.90	-0.0
4,439,276	+				-2.1
4,439,276	+				+0.9
4,439,276	+				+1.7
4,439,324	+				+0.7
4,439,365	+				+1.0
4,439,426	+				-0.8
4,439,442	+				+0.3
4,439,475	-				-0.3
4,439,547	+				+1.9
4,439,572	-				-3.0
4,439,615	+				+1.9
4,439,615	+				+1.3
4,439,615	+				+0.8
4,439,623	-				-1.3
4,439,623	-				-0.0
4,439,625	+				+0.1
4,439,673	+		MIT1002_03956	0.10	-0.6
4,439,683	-		MIT1002_03956	0.11	+0.8
4,439,707	-		MIT1002_03956	0.14	+1.2
4,439,725	+		MIT1002_03956	0.16	-1.3
4,439,730	+		MIT1002_03956	0.17	+1.3
4,439,731	-		MIT1002_03956	0.17	+0.1
4,439,738	-		MIT1002_03956	0.18	+0.8
4,439,865	+		MIT1002_03956	0.32	+0.3
4,439,867	-		MIT1002_03956	0.32	+1.2
4,439,897	-		MIT1002_03956	0.36	+0.4
4,439,897	-		MIT1002_03956	0.36	-2.0
4,439,916	+		MIT1002_03956	0.38	-1.8
4,439,927	+		MIT1002_03956	0.39	+0.3
4,439,960	+		MIT1002_03956	0.43	-2.1
4,440,007	+		MIT1002_03956	0.48	-0.5
4,440,007	+		MIT1002_03956	0.48	-1.2
4,440,009	+		MIT1002_03956	0.48	-0.2
4,440,009	+		MIT1002_03956	0.48	-2.2
4,440,009	+		MIT1002_03956	0.48	+1.5
4,440,009	+		MIT1002_03956	0.48	+0.1
4,440,009	+		MIT1002_03956	0.48	-0.3
4,440,009	-		MIT1002_03956	0.48	+0.4
4,440,009	-		MIT1002_03956	0.48	+0.9
4,440,017	-		MIT1002_03956	0.49	+0.5
4,440,017	-		MIT1002_03956	0.49	-0.5
4,440,035	+		MIT1002_03956	0.51	-1.1
4,440,035	+		MIT1002_03956	0.51	-1.6
4,440,035	+		MIT1002_03956	0.51	+0.2
4,440,043	-		MIT1002_03956	0.52	-0.0
4,440,043	-		MIT1002_03956	0.52	+1.0
4,440,044	+		MIT1002_03956	0.52	+0.1
4,440,131	-		MIT1002_03956	0.62	-0.9
4,440,197	-		MIT1002_03956	0.70	-0.7
4,440,214	+		MIT1002_03956	0.72	-1.0
4,440,214	+		MIT1002_03956	0.72	-0.3
4,440,234	-		MIT1002_03956	0.74	+0.4
4,440,251	+		MIT1002_03956	0.76	+0.4
4,440,251	-		MIT1002_03956	0.76	-2.0
4,440,270	+		MIT1002_03956	0.78	+0.5
4,440,443	-				+0.0
4,440,484	-				-0.4
4,440,511	-				-1.0
4,440,603	+				+0.6
4,440,634	-				-0.7
4,440,804	+				-1.5
4,440,930	+				-1.7
4,440,936	+		MIT1002_03957	0.10	-1.2
4,440,974	-		MIT1002_03957	0.14	-0.9
4,441,191	+		MIT1002_03957	0.36	+0.3
4,441,224	+		MIT1002_03957	0.39	-1.0
4,441,334	+		MIT1002_03957	0.50	-2.6
4,441,378	+		MIT1002_03957	0.55	-0.0
4,441,458	+		MIT1002_03957	0.63	-1.5
4,441,458	+		MIT1002_03957	0.63	-0.6